RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 NRMQ8IXM6 262 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 TBC1D3Q8IZP1 549 aaPredicted RBP14.66□□□□□ -0.06
HMGA1-202ENST00000347617 LNX2Q8N448 690 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 CLRN3Q8NCR9 226 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 OR10H4Q8NGA5 316 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 FAM3CQ92520 227 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 TFGQ92734 400 aaPredicted RBP14.66□□□□□ -0.06
HMGA1-202ENST00000347617 MRPL48Q96GC5 212 aaKnown RBP14.66□□□□□ -0.06
HMGA1-202ENST00000347617 PGLYRP3Q96LB9 341 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 APOOQ9BUR5 198 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 ABCG4Q9H172 646 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 SLC23A2Q9UGH3 650 aa14.66□□□□□ -0.06
HMGA1-202ENST00000347617 MRPS7Q9Y2R9 242 aaKnown RBP14.66□□□□□ -0.06
HMGA1-202ENST00000347617 PRR19A6NJB7 356 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SHISA7A6NL88 538 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 ZNF879B4DU55 563 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 OGG1O15527 345 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 EMC8O43402 210 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 TOXO94900 526 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 AGR2O95994 175 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 UCHL1P09936 223 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SRFP11831 508 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 GABRA1P14867 456 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 BMP7P18075 431 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 ATF1P18846 271 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 DRD5P21918 477 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 GPR4P46093 362 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 VEGFCP49767 419 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 GMFBP60983 142 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SLC3A1Q07837 685 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 TGM3Q08188 693 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 ILF3Q12906 894 aaKnown RBP eCLIP14.65□□□□□ -0.062e-9■□□□□ 8.4
HMGA1-202ENST00000347617 TMEM35AQ53FP2 167 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 TMUB2Q71RG4 321 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 GDF7Q7Z4P5 450 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 TTLQ8NG68 377 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 OR5K2Q8NHB8 316 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 MCHR1Q99705 422 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SARGQ9BW04 601 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SLC25A32Q9H2D1 315 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SLC38A1Q9H2H9 487 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 CMC2Q9NRP2 79 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 A0A0A6YYD5 115 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 A0A1B0GVC2 190 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 UBE2QL1A1L167 161 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 A6NIN4 97 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 RTCAO00442 366 aaKnown RBP14.65□□□□□ -0.06
HMGA1-202ENST00000347617 TMPRSS11DO60235 418 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SUSD5O60279 629 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 CLEC3AO75596 197 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 CEACAM5P06731 702 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SNRPBP14678 240 aaKnown RBP14.65□□□□□ -0.06
HMGA1-202ENST00000347617 NT5EP21589 574 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 IGFALSP35858 605 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 KIAA1024LP59773 190 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 MPPED2Q15777 294 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SMAD2Q15796 467 aaKnown RBP14.65□□□□□ -0.06
HMGA1-202ENST00000347617 EIPR1Q53HC9 387 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 OR4C11Q6IEV9 310 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 FAM180BQ6P0A1 224 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 Q6ZTK2 550 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 CACUL1Q86Y37 369 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 SYS1Q8N2H4 156 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 DTX3Q8N9I9 347 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 CAMKVQ8NCB2 501 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 ZNF671Q8TAW3 534 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 FCAMRQ8WWV6 532 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 KISS1RQ969F8 398 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-202ENST00000347617 PNPLA2Q96AD5 504 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 ART5Q96L15 291 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 NOX3Q9HBY0 568 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 LHX9Q9NQ69 397 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 ASF1AQ9Y294 204 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 PCYT1BQ9Y5K3 369 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-202ENST00000347617 BRWD1Q9NSI6 2320 aa14.65□□□□□ -0.06
HMGA1-202ENST00000347617 ANKRD20A5PA0PJZ0 165 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 LRRC72A6NJI9 287 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 ARPC1BO15143 372 aaKnown RBP14.64□□□□□ -0.07
HMGA1-202ENST00000347617 SLC2A10O95528 541 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 IGLV3-19P01714 112 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 HMGN2P05204 90 aaKnown RBP14.64□□□□□ -0.07
HMGA1-202ENST00000347617 LPLP06858 475 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 PROS1P07225 676 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 RAB40ALP0C0E4 278 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 SBK2P0C263 348 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 PRG2P13727 222 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 HOXB3P14651 431 aaPredicted RBP14.64□□□□□ -0.07
HMGA1-202ENST00000347617 ACTA2P62736 377 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 ACTG2P63267 376 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 TDGQ13569 410 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 CLVS2Q5SYC1 327 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 MEX3DQ86XN8 651 aaKnown RBP14.64□□□□□ -0.07
HMGA1-202ENST00000347617 NKAIN4Q8IVV8 208 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 CDH26Q8IXH8 852 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 OR5M9Q8NGP3 310 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 FANK1Q8TC84 345 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 THEM6Q8WUY1 208 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 RAB40AQ8WXH6 277 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 NSMAFQ92636 917 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 ORAI1Q96D31 301 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms