RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LOXL4Q96JB6 756 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 WNK3Q9BYP7 1800 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 QSER1Q2KHR3 1735 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 PTTG1O95997 202 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ADAP00813 363 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 IMPA1P29218 277 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 TNFSF8P32971 234 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 MTNR1AP48039 350 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ZP2Q05996 745 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 B3GLCTQ6Y288 498 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 STX12Q86Y82 276 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 DND1Q8IYX4 353 aaKnown RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 OR7G1Q8NGA0 311 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 METTL2AQ96IZ6 378 aaKnown RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CPNE5Q9HCH3 593 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 KCMF1Q9P0J7 381 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ATP23Q9Y6H3 246 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ATAD5Q96QE3 1844 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CSN2P05814 226 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 GAB1Q13480 694 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 GPR18Q14330 331 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 PLBD1Q6P4A8 553 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 OR51L1Q8NGJ5 315 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF431Q8TF32 576 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 BCL7CQ8WUZ0 217 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 TRMT61AQ96FX7 289 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 SRA1Q9HD15 236 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 CCDC59Q9P031 241 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 KLHL9Q9P2J3 617 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 SLC6A5Q9Y345 797 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 MYO7AQ13402 2215 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 TOR1AO14656 332 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 PRICKLE3O43900 615 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 PRKRAO75569 313 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 NCR1O76036 304 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 CR2P20023 1033 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 CTXN1P60606 82 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 PFN3P60673 137 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 MAB21L1Q13394 359 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 OR2A2Q6IF42 318 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 FRMPD2BQ6IN97 320 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 OR52R1Q8NGF1 315 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF486Q96H40 463 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 MRGPRX1Q96LB2 322 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 SLC46A1Q96NT5 459 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 RBM38Q9H0Z9 239 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 MYOTQ9UBF9 498 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 FAM96BQ9Y3D0 163 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 CDH10Q9Y6N8 788 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 TTC3P53804 2025 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 SLC14A1Q13336 389 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 MBTPS1Q14703 1052 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 COL13A1Q5TAT6 717 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 CEACAM19Q7Z692 300 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 CADM3Q8N126 398 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 SLC22A31A6NKX4 558 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 TSPAN4O14817 238 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 C1orf105O95561 183 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 PRH1P02810 166 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 HMGA1P17096 107 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 PCMT1P22061 227 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 NAXDQ8IW45 347 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 SFXN5Q8TD22 340 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 METTL8Q9H825 291 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 YBX2Q9Y2T7 364 aaKnown RBP10.12□□□□□ -0.79
CLCN6-202ENST00000346436 NPIPA5A0A0B4J1W7 369 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF814B7Z6K7 855 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 NPIPA7E9PJI5 369 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 GABARAPO95166 117 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 NPIPA8P0DM63 369 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 AVPR2P30518 371 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 RAD52P43351 418 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 CXCR4P61073 352 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 HBMQ6B0K9 141 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 NRARPQ7Z6K4 114 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 LINC01599Q8WXQ3 324 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 BTBD2Q9BX70 525 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF69Q9UC07 566 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 ADAM29Q9UKF5 820 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 LY75O60449 1722 aa10.12□□□□□ -0.79
CLCN6-202ENST00000346436 NUP214P35658 2090 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 NRXN2Q9P2S2 1712 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 A0A1W2PQ09 198 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 OR6C65A6NJZ3 312 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 FAM183AA6NL82 134 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 IGFBP1P08833 259 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-202ENST00000346436 PYCR1P32322 319 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF92Q03936 586 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 FAM205BPQ63HN1 556 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 LAX1Q8IWV1 398 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 APH1AQ96BI3 265 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 HINT2Q9BX68 163 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 B3GNT3Q9Y2A9 372 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 SLC16A6O15403 523 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 TMEM225BP0DP42 221 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 CPMP14384 443 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 MMP12P39900 470 aa10.11□□□□□ -0.79
CLCN6-202ENST00000346436 SOX2P48431 317 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms