RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZFP3Q96NJ6 502 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 OR5B2Q96R09 309 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 UCN2Q96RP3 112 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 KLHDC3Q9BQ90 382 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 TUBA1CQ9BQE3 449 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 TTYH2Q9BSA4 534 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 TRIM15Q9C019 465 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 DCAF13Q9NV06 445 aaKnown RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 ACTR3BQ9P1U1 418 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 FAM32AQ9Y421 112 aaKnown RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 ZNF175Q9Y473 711 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 USP9XQ93008 2570 aaPredicted RBP10.64□□□□□ -0.71
SNCA-202ENST00000345009 A0A1B0GWA3 101 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 TRAPPC13A5PLN9 417 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 HSPB2A8KAH6 182 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 M0R3H8 397 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 SULT2B1O00204 365 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 TNFSF11O14788 317 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 DNAJC8O75937 253 aaPredicted RBP10.64□□□□□ -0.71
SNCA-202ENST00000345009 OPN1LWP04000 364 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 ITGA2P17301 1181 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 CCNA2P20248 432 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 SUCLG1P53597 346 aaKnown RBP10.64□□□□□ -0.71
SNCA-202ENST00000345009 CRYBA2P53672 197 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 TAS2R41P59536 307 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 RAC3P60763 192 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 HSPB2Q16082 182 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 FXNQ16595 210 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 PPP4R4Q6NUP7 873 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 XKRXQ6PP77 449 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 TREML4Q6UXN2 200 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 FAM156AQ8NDB6 213 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 OR10D3Q8NH80 312 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 ASB5Q8WWX0 329 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 CPNE4Q96A23 557 aaPredicted RBP10.64□□□□□ -0.71
SNCA-202ENST00000345009 C3orf49Q96BT1 292 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 EPYCQ99645 322 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 POTEKPQ9BYX7 375 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 PCDHAC1Q9H158 963 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 MMADHCQ9H3L0 296 aaPredicted RBP10.64□□□□□ -0.71
SNCA-202ENST00000345009 PACSIN3Q9UKS6 424 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 TRAPPC4Q9Y296 219 aa10.64□□□□□ -0.71
SNCA-202ENST00000345009 A0A0J9YW62 118 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 ARPC2O15144 300 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 DNPH1O43598 174 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 OR2T1O43869 369 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 EFNA2O43921 213 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 EIF1BO60739 113 aaKnown RBP10.63□□□□□ -0.71
SNCA-202ENST00000345009 GPIP06744 558 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 GLI4P10075 376 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 THRBP10828 461 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 HOXB6P17509 224 aaKnown RBP10.63□□□□□ -0.71
SNCA-202ENST00000345009 IL11P20809 199 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 AGAP20933 346 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 MSX2P35548 267 aaPredicted RBP10.63□□□□□ -0.71
SNCA-202ENST00000345009 SLC35A1P78382 337 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 TRAP1Q12931 704 aaKnown RBP10.63□□□□□ -0.71
SNCA-202ENST00000345009 ENTPD8Q5MY95 495 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 RIPPLY2Q5TAB7 128 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 DEF8Q6ZN54 512 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 TMPPEQ6ZT21 453 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 ATG4DQ86TL0 474 aaPredicted RBP10.63□□□□□ -0.71
SNCA-202ENST00000345009 GGNQ86UU5 652 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 MCEMP1Q8IX19 187 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 SLC43A2Q8N370 569 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 STK35Q8TDR2 534 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 SLC38A4Q969I6 547 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 ZNF524Q96C55 264 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 ASB9Q96DX5 294 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 PYURFQ96I23 114 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 MPP4Q96JB8 637 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 HSH2DQ96JZ2 352 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 DMRTA2Q96SC8 542 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 NPAS1Q99742 590 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 TAPBPLQ9BX59 468 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 GLRX2Q9NS18 164 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 FAM215AQ9Y5M1 114 aa10.63□□□□□ -0.71
SNCA-202ENST00000345009 A0A087WUJ7 227 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 A0A0B4J2E0 115 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 A0A1B0GX12 115 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 TMEM72A0PK05 275 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 MBD3L4A6NDZ8 208 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 MBD3L3A6NE82 208 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 MBD3L5A6NJ08 208 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 CPSF4LA6NMK7 179 aaKnown RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 CHP2O43745 196 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 CXCL13O43927 109 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 SEMA7AO75326 666 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 RCBTB2O95199 551 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 OR5F1O95221 314 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 AHSA1O95433 338 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 PMS2P2O95744 297 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 PLGP00747 810 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 CRHP06850 196 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 ENPP1P22413 925 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 HTR2AP28223 471 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 GTF2E2P29084 291 aaKnown RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 CHRNB4P30926 498 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 IDUAP35475 653 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 OR1E2P47887 323 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms