RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 STON2Q8WXE9 905 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 ACTR6Q9GZN1 396 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 ADAM19Q9H013 955 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 NPHS2Q9NP85 383 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 A4GALTQ9NPC4 353 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 PRSS50Q9UI38 385 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 DCTN4Q9UJW0 460 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 TMED7Q9Y3B3 224 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 HDGFL3Q9Y3E1 203 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 SPIN1Q9Y657 262 aaPredicted RBP12.8□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF716A6NP11 495 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 THBS1P07996 1170 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 IMPDH2P12268 514 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 NTF4P34130 210 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 HTR3AP46098 478 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 POLR2HP52434 150 aaKnown RBP12.79□□□□□ -0.36
HMGN3-202ENST00000344726 MTDHQ86UE4 582 aaKnown RBP12.79□□□□□ -0.36
HMGN3-202ENST00000344726 RAD21L1Q9H4I0 556 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
HMGN3-202ENST00000344726 BCL2L10Q9HD36 194 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 TMEM45AQ9NWC5 275 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 THUMPD1Q9NXG2 353 aaKnown RBP12.79□□□□□ -0.36
HMGN3-202ENST00000344726 GPR52Q9Y2T5 361 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 GMEB1Q9Y692 573 aa12.79□□□□□ -0.36
HMGN3-202ENST00000344726 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 PLCE1Q9P212 2302 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 IGKV3D-15A0A087WSY6 115 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.78□□□□□ -0.36
HMGN3-202ENST00000344726 A0A1W2PP18 115 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF208O43345 1280 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 FRS3O43559 492 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 PGM3O95394 542 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 PLAUP00749 431 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 ADAP00813 363 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 ARAFP10398 606 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 PPP3CBP16298 524 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 NCF2P19878 526 aaPredicted RBP12.78□□□□□ -0.36
HMGN3-202ENST00000344726 OR3A2P47893 321 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 CLK1P49759 484 aaKnown RBP12.78□□□□□ -0.36
HMGN3-202ENST00000344726 H3F3AP84243 136 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 LARS2Q15031 903 aaKnown RBP12.78□□□□□ -0.36
HMGN3-202ENST00000344726 SFRP5Q5T4F7 317 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 DLEU7Q6UYE1 221 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 SERPINA11Q86U17 422 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 COMTD1Q86VU5 262 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 CCDC103Q8IW40 242 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF440Q8IYI8 595 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 NFKBIDQ8NI38 313 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 S100PBPQ96BU1 408 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 TACO1Q9BSH4 297 aaKnown RBP12.78□□□□□ -0.36
HMGN3-202ENST00000344726 SPATA9Q9BWV2 254 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 UBTD1Q9HAC8 227 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
HMGN3-202ENST00000344726 TMEM181Q9P2C4 612 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 EDARQ9UNE0 448 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 ALPK2Q86TB3 2170 aa12.78□□□□□ -0.36
HMGN3-202ENST00000344726 HEATR1Q9H583 2144 aaKnown RBP12.77□□□□□ -0.36
HMGN3-202ENST00000344726 TMEM247A6NEH6 219 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 FKBP2P26885 142 aaKnown RBP12.77□□□□□ -0.37
HMGN3-202ENST00000344726 PRSS12P56730 875 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 OR2B6P58173 313 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 IRX1P78414 480 aaPredicted RBP12.77□□□□□ -0.37
HMGN3-202ENST00000344726 HOXC5Q00444 222 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 BNIP2Q12982 314 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 PDK3Q15120 406 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 ZNF311Q5JNZ3 666 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 GCNT6Q5T4J0 391 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 PRAMEF8Q5VWM4 474 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 PRAMEF7Q5VXH5 474 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 SEZ6L2Q6UXD5 910 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 Q6ZT83 130 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 GALNT5Q7Z7M9 940 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 ATG4DQ86TL0 474 aaPredicted RBP12.77□□□□□ -0.37
HMGN3-202ENST00000344726 RETREG3Q86VR2 466 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 WFDC8Q8IUA0 241 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 CADM2Q8N3J6 435 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 BBS10Q8TAM1 723 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 IGFBPL1Q8WX77 278 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 DDIT4LQ96D03 193 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 OR10A4Q9H209 315 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 FANCFQ9NPI8 374 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 ZNF232Q9UNY5 417 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 TRAPPC4Q9Y296 219 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 IFT52Q9Y366 437 aa12.77□□□□□ -0.37
HMGN3-202ENST00000344726 A0A0G2JND7 137 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 DNPH1O43598 174 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 UQCRBP14927 111 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 GPX2P18283 190 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 FPR1P21462 350 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 SLC16A1P53985 500 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 ITGADQ13349 1161 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 SELPLGQ14242 412 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 TAB1Q15750 504 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 ADRM1Q16186 407 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 ACKR1Q16570 336 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 RUNDC3AQ59EK9 446 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
HMGN3-202ENST00000344726 WBP2NLQ6ICG8 309 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms