RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 GRPRP30550 384 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 RPS5P46782 204 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 RAB25P57735 213 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF141Q15928 474 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SLC25A35Q3KQZ1 300 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 HBMQ6B0K9 141 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SFXN4Q6P4A7 337 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 PAMR1Q6UXH9 720 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ASB18Q6ZVZ8 466 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 OR4M1Q8NGD0 313 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 OR6K6Q8NGW6 343 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNRF4Q8WWF5 429 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 AHCYL2Q96HN2 611 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ORAI3Q9BRQ5 295 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 TMEM43Q9BTV4 400 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 G6PC3Q9BUM1 346 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SPRTNQ9H040 489 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 MOV10Q9HCE1 1003 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 CHRNA9Q9UGM1 479 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 BAIAP2Q9UQB8 552 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 HEATR5AQ86XA9 2040 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ABCA7Q8IZY2 2146 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 IGHV5-51A0A0C4DH38 117 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 FAM240BA0A1B0GVZ2 78 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 C10orf142B7Z368 130 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 PSMD9O00233 223 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 LYRM1O43325 122 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SRPX2O60687 465 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SLC19A2O60779 497 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ERVK-25P63136 954 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ACSM3Q53FZ2 586 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 C10orf53Q8N6V4 93 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF321PQ8N8H1 164 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 TSTD1Q8NFU3 115 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 OR51Q1Q8NH59 317 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 RASD2Q96D21 266 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 DNAJA3Q96EY1 480 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 TCTN2Q96GX1 697 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 PGLYRP3Q96LB9 341 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 GPR27Q9NS67 375 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 A0A0B4J203 849 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 HMX3A6NHT5 357 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 NPIPB9F8W1W9 429 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 TCEA1P23193 301 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 CFL1P23528 166 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SKP1P63208 163 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 TATDN3Q17R31 274 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 DEFB133Q30KQ1 61 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 RNASE12Q5GAN4 147 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SLC7A6Q92536 515 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 PNO1Q9NRX1 252 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 GNG8Q9UK08 70 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 A6NL46 340 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 LANCL1O43813 399 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 SELENOFO60613 162 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 NSA2O95478 260 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 IFI6P09912 130 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 GAAP10253 952 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 GALP22466 123 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 IGFBP4P22692 258 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 PSMB10P40306 273 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 MZT2BQ6NZ67 158 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 METAP1DQ6UB28 335 aaPredicted RBP13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 LINC00114Q6XXX2 140 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 C7orf57Q8NEG2 295 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 OR6C4Q8NGE1 309 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 SNX33Q8WV41 574 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 CNN2Q99439 309 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 RBFOX1Q9NWB1 397 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 ALPK2Q86TB3 2170 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 A0A1B0GVT2 93 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 C17orf105B2RV13 164 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 CHURC1-FNTBB4DL54 471 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 BLOC1S5-TXNDC5H3BN57 136 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 OIP5O43482 229 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 IGLV3-19P01714 112 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 THBS2P35442 1172 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 TALDO1P37837 337 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 DDOSTP39656 456 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 FNTBP49356 437 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 GPR143P51810 404 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 TAS2R43P59537 309 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 ACTC1P68032 377 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 ACTA1P68133 377 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 TRMT10AQ8TBZ6 339 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 GFM1Q96RP9 751 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF576Q9H609 170 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF346Q9UL40 294 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 PCDHGB7Q9Y5F8 929 aa13.65□□□□□ -0.22
VIPAS39-202ENST00000343765 CABIN1Q9Y6J0 2220 aa13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 CENPXA8MT69 81 aa13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 HLA-DQB1P01920 261 aa13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 HPGDP15428 266 aa13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 ALAS2P22557 587 aa13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 ELOCQ15369 112 aa13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 CD226Q15762 336 aa13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 DMKNQ6E0U4 476 aaPredicted RBP13.64□□□□□ -0.23
VIPAS39-202ENST00000343765 MED25Q71SY5 747 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms