RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 ATG4BQ9Y4P1 393 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 SCN3AQ9NY46 2000 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 GABARAPH6UMI1 98 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 KPNA3O00505 521 aaPredicted RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 RASGRP1O95267 797 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 PTH2RP49190 550 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 HOXA1P49639 335 aaPredicted RBP13.73□□□□□ -0.21
CLCN1-201ENST00000343257 AP3S2P59780 193 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 GUCA2AQ02747 115 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 KCNAB1Q14722 419 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 FAM209BQ5JX69 171 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 SDR9C7Q8NEX9 313 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 VN1R2Q8NFZ6 395 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 PELI1Q96FA3 418 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 HS6ST2Q96MM7 605 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 GFI1Q99684 422 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 WDR13Q9H1Z4 485 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 TMEM231Q9H6L2 316 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 TM7SF3Q9NS93 570 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 SPG21Q9NZD8 308 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 ST6GALNAC2Q9UJ37 374 aa13.73□□□□□ -0.21
CLCN1-201ENST00000343257 SCN10AQ9Y5Y9 1956 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ALPK2Q86TB3 2170 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 A0A1B0GVT2 93 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 OR6C65A6NJZ3 312 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 MAN2B1O00754 1011 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 NARSO43776 548 aaKnown RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 SC5DO75845 299 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 MPIP34949 423 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 SCRN3Q0VDG4 424 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 B3GNTL1Q67FW5 361 aaPredicted RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 TMED4Q7Z7H5 227 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 METTL3Q86U44 580 aaKnown RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 MCATQ8IVS2 390 aaKnown RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 PUSL1Q8N0Z8 303 aaKnown RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 PCSK9Q8NBP7 692 aaKnown RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 OR2AK2Q8NG84 335 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 OR4K13Q8NH42 304 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 LCORQ96JN0 433 aaPredicted RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ARHGDIGQ99819 225 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ZDHHC5Q9C0B5 715 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF106Q9H2Y7 1883 aaKnown RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 BCL2L10Q9HD36 194 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ARL6IP5O75915 188 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ECDO95905 644 aaPredicted RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 SERPINA3P01011 423 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ASGR2P07307 311 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 SRMP19623 302 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 FAM46CQ5VWP2 391 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 OR4C11Q6IEV9 310 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 TSSK4Q6SA08 328 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 LDLRAD3Q86YD5 345 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 C2orf15Q8WU43 125 aaKnown RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 OVCA2Q8WZ82 227 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 CDS1Q92903 461 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 CRB3Q9BUF7 120 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF471Q9BX82 626 aaPredicted RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 TSPAN10Q9H1Z9 355 aaPredicted RBP13.72□□□□□ -0.21
CLCN1-201ENST00000343257 IL21RQ9HBE5 538 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 ASF1BQ9NVP2 202 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 SCN2AQ99250 2005 aa13.72□□□□□ -0.21
CLCN1-201ENST00000343257 SLC22A31A6NKX4 558 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 PIN1P1O15428 100 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.21
CLCN1-201ENST00000343257 CTSLP07711 333 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 MEOX2P50222 304 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 GMFBP60983 142 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 FKBP1BP68106 108 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 NDUFAF6Q330K2 333 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF805Q5CZA5 627 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 MRM1Q6IN84 353 aaKnown RBP13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF546Q86UE3 836 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 OR4N5Q8IXE1 308 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 KLHDC8AQ8IYD2 350 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF614Q8N883 585 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ADAMTS15Q8TE58 950 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 S100A16Q96FQ6 103 aaKnown RBP13.71□□□□□ -0.21
CLCN1-201ENST00000343257 SEC22AQ96IW7 307 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 C19orf43Q9BQ61 176 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ACSS1Q9NUB1 689 aaPredicted RBP13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ANKRD10Q9NXR5 420 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 COA4Q9NYJ1 87 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 SLC45A1Q9Y2W3 748 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 A0A1W2PR48 441 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 TMEM200CA6NKL6 621 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 RIIAD1A6NNX1 92 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 CACNB4O00305 520 aaPredicted RBP13.71□□□□□ -0.21
CLCN1-201ENST00000343257 BHLHE40O14503 412 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 SCAMP1O15126 338 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 NDUFB6O95139 128 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 CTGFP29279 349 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 RAB13P51153 203 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 SWI5Q1ZZU3 235 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 SLC8B1Q6J4K2 584 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 ZCCHC12Q6PEW1 402 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 OR4C6Q8NH72 309 aa13.71□□□□□ -0.21
CLCN1-201ENST00000343257 KCNK15Q9H427 330 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms