RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 EIF1BO60739 113 aaKnown RBP13.96□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF136P52737 540 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 GGTA1PQ4G0N0 100 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 OR4N2Q8NGD1 307 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 OR13C2Q8NGS9 318 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 CNOT9Q92600 299 aaKnown RBP13.96□□□□□ -0.17
UBE3B-202ENST00000342494 THOC3Q96J01 351 aaKnown RBP13.96□□□□□ -0.17
UBE3B-202ENST00000342494 CDCP1Q9H5V8 836 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 SLC22A5O76082 557 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 ABHD16AO95870 558 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 GAAP10253 952 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 C18orf63Q68DL7 685 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 SERPINA12Q8IW75 414 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 SLC7A13Q8TCU3 470 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 GORASP2Q9H8Y8 452 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 INPP5EQ9NRR6 644 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 OLAHQ9NV23 265 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 MYOTQ9UBF9 498 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 MEIS3P1A6NDR6 274 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 CEBPZOSA8MTT3 80 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 GPR171O14626 319 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 TPPPO94811 219 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 CAPNS1P04632 268 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 TP53P04637 393 aaPredicted RBP13.96□□□□□ -0.18
UBE3B-202ENST00000342494 DHRS4L1P0CG22 281 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 ARAFP10398 606 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 KIAA1024LP59773 190 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 MPEG1Q2M385 716 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 HYAL4Q2M3T9 481 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 GDPD1Q8N9F7 314 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 FNDC9Q8TBE3 224 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 FNDC8Q8TC99 324 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 IFI44Q8TCB0 444 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 AGPAT4Q9NRZ5 378 aa13.96□□□□□ -0.18
UBE3B-202ENST00000342494 TMED7-TICAM2A0A0A6YYA0 188 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 hCG_1809904A0A1W2PP81 198 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 A0A1W2PPE2 198 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 A0A1W2PR64 198 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 A0A1W2PRV1 198 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 WNT11O96014 354 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 AKAIN1P0CW23 69 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 SLCO4C1Q6ZQN7 724 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF687Q8N1G0 1237 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 CCDC74AQ96AQ1 378 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 KATNB1Q9BVA0 655 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 R3HDMLQ9H3Y0 253 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 TMED7Q9Y3B3 224 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 PLEKHM1Q9Y4G2 1056 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 TNFRSF10CO14798 259 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 HOXC11O43248 304 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 OR7C1O76099 320 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 IL7P13232 177 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 MGAT3Q09327 533 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 SULF2Q8IWU5 870 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 TBCCD1Q9NVR7 557 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 NAV1Q8NEY1 1877 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 H7C2Y5 167 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 SLC35E2P0CK97 266 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 LUMP51884 338 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 S100A12P80511 92 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 GPR176Q14439 515 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 AGAP7PQ5VUJ5 663 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 AGAP6Q5VW22 663 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 SLC37A2Q8TED4 501 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 AGAP4Q96P64 663 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 SORCS2Q96PQ0 1159 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 LHPPQ9H008 270 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 EBF1Q9UH73 591 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 FUOMA2VDF0 154 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF814B7Z6K7 855 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 CTNSO60931 367 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 IFNA17P01571 189 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 EDN3P14138 238 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 ADPRHP54922 357 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 RNF113BQ8IZP6 322 aaKnown RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 MS4A8Q9BY19 250 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF355PQ9NSJ1 428 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 GNG12Q9UBI6 72 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 TRAPPC2LQ9UL33 140 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 METTL15A6NJ78 407 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 SURF4O15260 269 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 ENSAO43768 121 aaKnown RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 HEXAP06865 529 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 PRKACBP22694 351 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 STT3AP46977 705 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 RPL23AP62750 156 aaKnown RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 SF3A2Q15428 464 aaKnown RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 USF2Q15853 346 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 DPY19L2P1Q6NXN4 242 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 CNIH2Q6PI25 160 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 COX15Q7KZN9 410 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 GPR155Q7Z3F1 870 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 S100A7AQ86SG5 101 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 DNAJC22Q8N4W6 341 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 DCUN1D4Q92564 292 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 TAAR8Q969N4 342 aa13.95□□□□□ -0.18
UBE3B-202ENST00000342494 DPCDQ9BVM2 203 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-202ENST00000342494 TRAV36DV7A0A075B6V5 113 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms