RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 E9PQ18 207 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 G3V3Y1 287 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 SUSD5O60279 629 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 CLPTM1O96005 669 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 EIF2S3P41091 472 aaKnown RBP15.75■□□□□ 0.11
CLDN4-201ENST00000340958 ZNF468Q5VIY5 522 aaPredicted RBP15.75■□□□□ 0.11
CLDN4-201ENST00000340958 SMARCD3Q6STE5 483 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 ARSKQ6UWY0 536 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 GPALPP1Q8IXQ4 340 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 CLDN22Q8N7P3 220 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 FBLIM1Q8WUP2 373 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 THAP4Q8WY91 577 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 IL20Q9NYY1 176 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 TMED7Q9Y3B3 224 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 TPRKBQ9Y3C4 175 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 A0A087WXM4 84 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 HTR3EA5X5Y0 456 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 A6NL46 340 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 SLC1A7O00341 560 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 F10P00742 488 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 PRKCAP17252 672 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 TCEA1P23193 301 aaKnown RBP15.75■□□□□ 0.11
CLDN4-201ENST00000340958 CDH15P55291 814 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 CDK5Q00535 292 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 ZBED5Q49AG3 693 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 C12orf73Q69YU5 71 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 RHOXF1Q8NHV9 184 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 PSMF1Q92530 271 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 TSC22D3Q99576 134 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 IFT27Q9BW83 186 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 ANGPTL4Q9BY76 406 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 SLC25A19Q9HC21 320 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 NANSQ9NR45 359 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 SACM1LQ9NTJ5 587 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 MED17Q9NVC6 651 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 ZNF226Q9NYT6 803 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 ZNF337Q9Y3M9 751 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 EXPH5Q8NEV8 1989 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 IGKV1D-42A0A075B6H8 117 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 ADAM10O14672 748 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 OR7A10O76100 309 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 SNX4O95219 450 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 HIST1H2ABP04908 130 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 CRHBPP24387 322 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 PCYT1AP49585 367 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 HLCSP50747 726 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 CSNK2BP67870 215 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 INPP5JQ15735 1006 aaPredicted RBP15.74■□□□□ 0.11
CLDN4-201ENST00000340958 SMN1Q16637 294 aaKnown RBP15.74■□□□□ 0.11
CLDN4-201ENST00000340958 FOXB2Q5VYV0 432 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 ACSM5Q6NUN0 579 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 LINC00696Q6ZRV3 163 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 HIST3H2AQ7L7L0 130 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 MDGA2Q7Z553 956 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 PLCZ1Q86YW0 608 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 TCEANCQ8N8B7 351 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 ZNF540Q8NDQ6 660 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 ZNF248Q8NDW4 579 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 ATP6V1C2Q8NEY4 427 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 OR8D4Q8NGM9 314 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 OR1J4Q8NGS1 313 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 TRUB1Q8WWH5 349 aaKnown RBP15.74■□□□□ 0.11
CLDN4-201ENST00000340958 HIST1H2ACQ93077 130 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 Q96MT0 163 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 TNFRSF13CQ96RJ3 184 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 UTP23Q9BRU9 249 aaKnown RBP15.74■□□□□ 0.11
CLDN4-201ENST00000340958 CCDC90BQ9GZT6 254 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 PCDHGB6Q9Y5F9 930 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 CACNA1BQ00975 2339 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 ITPR1Q14643 2758 aa15.74■□□□□ 0.11
CLDN4-201ENST00000340958 IGLV3-32A0A0A0MS00 114 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 LRRN3E7EW58 273 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 NKX2-8O15522 239 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 TLX2O43763 284 aaPredicted RBP15.73■□□□□ 0.11
CLDN4-201ENST00000340958 XPNPEP2O43895 674 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 CCDC159P0C7I6 412 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 CALRP27797 417 aaKnown RBP15.73■□□□□ 0.11
CLDN4-201ENST00000340958 APOBEC1P41238 236 aaKnown RBP15.73■□□□□ 0.11
CLDN4-201ENST00000340958 RPS5P46782 204 aaKnown RBP15.73■□□□□ 0.11
CLDN4-201ENST00000340958 SLC9A3P48764 834 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 CXCR4P61073 352 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 TMEM81Q6P7N7 255 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 GALNT16Q8N428 558 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 OR2M3Q8NG83 312 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 OR8J1Q8NGP2 316 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 KTI12Q96EK9 354 aaPredicted RBP15.73■□□□□ 0.11
CLDN4-201ENST00000340958 DNAJA3Q96EY1 480 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 LRFN1Q9P244 771 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 FBXL2Q9UKC9 423 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 SIGLEC7Q9Y286 467 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 TMEM72A0PK05 275 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 A8MVM7 634 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 HMGN1P05114 100 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 NOS3P29474 1203 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 RPL4P36578 427 aaKnown RBP15.73■□□□□ 0.11
CLDN4-201ENST00000340958 MLLT10P55197 1068 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 FOXF1Q12946 379 aa15.73■□□□□ 0.11
CLDN4-201ENST00000340958 SRSF6Q13247 344 aaKnown RBP15.73■□□□□ 0.11
CLDN4-201ENST00000340958 PGGHGQ32M88 737 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms