RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ETFDHQ16134 617 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 C9orf135Q5VTT2 229 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 KLHL17Q6TDP4 642 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 SEZ6L2Q6UXD5 910 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 TMEM108Q6UXF1 575 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 CASP12Q6UXS9 341 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 SPATA19Q7Z5L4 167 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 GOLGA6L1Q8N7Z2 621 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 MGARPQ8TDB4 240 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 WDR60Q8WVS4 1066 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 TLCD1Q96CP7 247 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 TRNT1Q96Q11 434 aaKnown RBP17.14■□□□□ 0.33
ITGA4-202ENST00000339307 NAA11Q9BSU3 229 aaPredicted RBP17.14■□□□□ 0.33
ITGA4-202ENST00000339307 REG4Q9BYZ8 158 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 SLCO5A1Q9H2Y9 848 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 WDR55Q9H6Y2 383 aaPredicted RBP17.14■□□□□ 0.33
ITGA4-202ENST00000339307 NPAP1Q9NZP6 1156 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 UPB1Q9UBR1 384 aa17.14■□□□□ 0.33
ITGA4-202ENST00000339307 GDF2Q9UK05 429 aaPredicted RBP17.14■□□□□ 0.33
ITGA4-202ENST00000339307 NSD1Q96L73 2696 aaPredicted RBP17.14■□□□□ 0.33
ITGA4-202ENST00000339307 IGKV3D-15A0A087WSY6 115 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 ZNF716A6NP11 495 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 SHISA9B4DS77 424 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 M0R1B8 84 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 ATP8B1O43520 1251 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 ADAM11O75078 769 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 PGRP06401 933 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 UQCRBP14927 111 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 EPHA3P29320 983 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 TACR3P29371 465 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 CLK1P49759 484 aaKnown RBP17.13■□□□□ 0.33
ITGA4-202ENST00000339307 POLR2HP52434 150 aaKnown RBP17.13■□□□□ 0.33
ITGA4-202ENST00000339307 SSX8Q7RTT4 187 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 LRRC34Q8IZ02 419 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 TRAF4Q9BUZ4 470 aaPredicted RBP17.13■□□□□ 0.33
ITGA4-202ENST00000339307 MTHFD2LQ9H903 347 aaPredicted RBP17.13■□□□□ 0.33
ITGA4-202ENST00000339307 AIG1Q9NVV5 245 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 HIVEP2P31629 2446 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 TMEM72A0PK05 275 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 AGAP5A6NIR3 686 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 SDHDO14521 159 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 SSX4O60224 188 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 PGM3O95394 542 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 IGHV4-39P01824 125 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 CHRM4P08173 479 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 IL12AP29459 219 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 SLC35A1P78382 337 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 DMTNQ08495 405 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 COX20Q5RI15 118 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 AGAP6Q5VW22 663 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 OGFOD2Q6N063 350 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 DNAJC14Q6Y2X3 702 aaPredicted RBP17.13■□□□□ 0.33
ITGA4-202ENST00000339307 LRRC74BQ6ZQY2 392 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 CMIPQ8IY22 773 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 DEPDC4Q8N2C3 294 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 OR52E4Q8NGH9 312 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 SLC38A1Q9H2H9 487 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 TAS2R16Q9NYV7 291 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 HAO1Q9UJM8 370 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 OSGIN1Q9UJX0 560 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 TRAPPC4Q9Y296 219 aa17.13■□□□□ 0.33
ITGA4-202ENST00000339307 CFAP73A6NFT4 308 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 TRPC5OSA6NMA1 111 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 RFXANKO14593 260 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 DNPH1O43598 174 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 ANP32DO95626 131 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 KRT75O95678 551 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 CD8AP01732 235 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 NTF4P34130 210 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 SPOCK1Q08629 439 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 MRPL2Q5T653 305 aaKnown RBP17.12■□□□□ 0.33
ITGA4-202ENST00000339307 PEX5LQ8IYB4 626 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 PMM1Q92871 262 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 RADILQ96JH8 1075 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 BARX1Q9HBU1 254 aaPredicted RBP17.12■□□□□ 0.33
ITGA4-202ENST00000339307 PARPBPQ9NWS1 579 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 MGAT4BQ9UQ53 548 aa17.12■□□□□ 0.33
ITGA4-202ENST00000339307 CSPG4Q6UVK1 2322 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 EIF1BO60739 113 aaKnown RBP17.11■□□□□ 0.33
ITGA4-202ENST00000339307 DBIP07108 87 aaKnown RBP17.11■□□□□ 0.33
ITGA4-202ENST00000339307 CXCR1P25024 350 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 PTAFRP25105 342 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 SLC1A3P43003 542 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 CRATP43155 626 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 PLAURQ03405 335 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 LRRC74AQ0VAA2 488 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 OR7E24Q6IFN5 339 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 CADM2Q8N3J6 435 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 ADAD1Q96M93 576 aaKnown RBP17.11■□□□□ 0.33
ITGA4-202ENST00000339307 RLIMQ9NVW2 624 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 B3GALT5Q9Y2C3 310 aa17.11■□□□□ 0.33
ITGA4-202ENST00000339307 HMGB1P1B2RPK0 211 aaPredicted RBP17.1■□□□□ 0.33
ITGA4-202ENST00000339307 HDAC3O15379 428 aa17.1■□□□□ 0.33
ITGA4-202ENST00000339307 ZNF208O43345 1280 aa17.1■□□□□ 0.33
ITGA4-202ENST00000339307 GKN3PP0CG01 181 aa17.1■□□□□ 0.33
ITGA4-202ENST00000339307 IMPDH2P12268 514 aa17.1■□□□□ 0.33
ITGA4-202ENST00000339307 CDH2P19022 906 aaPredicted RBP17.1■□□□□ 0.33
ITGA4-202ENST00000339307 FABP6P51161 128 aa17.1■□□□□ 0.33
ITGA4-202ENST00000339307 NUDT6P53370 316 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms