RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ARHGAP40Q5TG30 622 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM107Q6UX40 140 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR2T27Q8NH04 317 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 OR51A7Q8NH64 312 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SLC39A9Q9NUM3 307 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SLC27A5Q9Y2P5 690 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CCL22O00626 93 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 TRAF3IP2O43734 574 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 AADACP22760 399 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 TACR3P29371 465 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 HTR1FP30939 366 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 HMGCLP35914 325 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 RPE65Q16518 533 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 FAM110CQ1W6H9 321 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 WDR73Q6P4I2 378 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF322Q6U7Q0 402 aaPredicted RBP5.18□□□□□ -1.58
PTPRB-202ENST00000334414 CRTC1Q6UUV9 634 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 FAM213BQ8TBF2 198 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 TVP23CQ96ET8 276 aa5.18□□□□□ -1.58
PTPRB-202ENST00000334414 SMIM30A4D0T7 59 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GRXCR1A8MXD5 290 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RGS13O14921 159 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 KLK3P07288 261 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GALP22466 123 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TNFSF4P23510 183 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GP2P55259 537 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GRB7Q14451 532 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 EBPQ15125 230 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 COX19Q49B96 90 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 WWTR1Q9GZV5 400 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 C11orf54Q9H0W9 315 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ESRP2Q9H6T0 727 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 MMP26Q9NRE1 261 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF230Q9UIE0 474 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RCE1Q9Y256 329 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ACTL7AQ9Y615 435 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 A0A0U1RQK1 487 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 SYT5O00445 386 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 DVL1O14640 695 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 YY2O15391 372 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 NSA2O95478 260 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GALTP07902 379 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 SYN1P17600 705 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 DVL1P1P54792 670 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TSPAN31Q12999 210 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 Q3ZCU0 254 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RNF111Q6ZNA4 994 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM239Q8WW34 195 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 PDLIM5Q96HC4 596 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 METTL9Q9H1A3 318 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 PURGQ9UJV8 347 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 AK6Q9Y3D8 172 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 PAPLNO95428 1278 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ZP2Q05996 745 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 NADSYN1Q6IA69 706 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 PGBD5Q8N414 524 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 HUS1BQ8NHY5 278 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 FUBP1Q96AE4 644 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 BPIFA2Q96DR5 249 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ACSS1Q9NUB1 689 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 N4BP2Q86UW6 1770 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CA12O43570 354 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TRHRP34981 398 aaPredicted RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 HOXD13P35453 343 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 KCNJ5P48544 419 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RAB13P51153 203 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ILKQ13418 452 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 SAMD7Q7Z3H4 446 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CATSPERDQ86XM0 798 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GRAMD2AQ8IUY3 354 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 GPR137CQ8N3F9 429 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 OR51A2Q8NGJ7 313 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 LPPQ93052 612 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 PITX2Q99697 317 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 JAM3Q9BX67 310 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM59Q9BXS4 323 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 C5P01031 1676 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 HNRNPA3P51991 378 aaKnown RBP5.17□□□□□ -1.58
PTPRB-202ENST00000334414 DCAF7P61962 342 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 VRK3Q8IV63 474 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 SPICQ8N5J4 248 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 OR6S1Q8NH40 331 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TTC9Q92623 222 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 MRGPRX2Q96LB1 330 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 PEAK1Q9H792 1746 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CEBPZOSA8MTT3 80 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 SGK494L7N484 410 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ASGR2P07307 311 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 T-ENOLP0DO92 83 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CLCNKAP51800 687 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 EPHA4P54764 986 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 CXADRP78310 365 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 REEP5Q00765 189 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 BAXQ07812 192 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 RTL8BQ17RB0 113 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 POM121L1PQ3SYA9 428 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF805Q5CZA5 627 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TOR2AQ5JU69 321 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 TCTEX1D1Q8N7M0 179 aa5.17□□□□□ -1.58
PTPRB-202ENST00000334414 OR13C8Q8NGS7 320 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms