RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TMED7Q9Y3B3 224 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 SAMHD1Q9Y3Z3 626 aaKnown RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 NBASA2RRP1 2371 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 ETV2O00321 342 aaPredicted RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 TFECO14948 347 aaPredicted RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 SUSD5O60279 629 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 GADD45GO95257 159 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 HPNP05981 417 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 H1F0P07305 194 aaKnown RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 POU2F1P14859 743 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 MSX1P28360 303 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 SLC6A8P48029 635 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 SUMO3P55854 103 aaPredicted RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 COPZ1P61923 177 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 NFATC3Q12968 1075 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 LINC00114Q6XXX2 140 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 PRICKLE2Q7Z3G6 844 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 CHERPQ8IWX8 916 aaKnown RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 ZNF440Q8IYI8 595 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 PQLC1Q8N2U9 271 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 MARVELD2Q8N4S9 558 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 SLC38A4Q969I6 547 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 MPP4Q96JB8 637 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 TRIM2Q9C040 744 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 OR2B2Q9GZK3 357 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 ADNPQ9H2P0 1102 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 TUBD1Q9UJT1 453 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 OAZ3Q9UMX2 235 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 FAM32AQ9Y421 112 aaKnown RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 PCDHGB7Q9Y5F8 929 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 PCDHGB6Q9Y5F9 930 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 CHD6Q8TD26 2715 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 A0A087WUJ7 227 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 ERVH48-1M5A8F1 160 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 TNFRSF11BO00300 401 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 FAAHO00519 579 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 SEC14L5O43304 696 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 CHP2O43745 196 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 FMO6PO60774 539 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 OR5F1O95221 314 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 IGFBP1P08833 259 aaPredicted RBP14.88□□□□□ -0.03
SHOX-201ENST00000334060 DBPQ10586 325 aaPredicted RBP14.88□□□□□ -0.03
SHOX-201ENST00000334060 HYAL4Q2M3T9 481 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 ZNF613Q6PF04 617 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 GRINAQ7Z429 371 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 NRMQ8IXM6 262 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 TEX19Q8NA77 164 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 MOGAT1Q96PD6 335 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 CIB1Q99828 191 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 ZNF426Q9BUY5 554 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 SMURF2Q9HAU4 748 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 RPS6KB2Q9UBS0 482 aa14.88□□□□□ -0.03
SHOX-201ENST00000334060 ZNF814B7Z6K7 855 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 CDC42EP2O14613 210 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 MAKP20794 623 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 FASP25445 335 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 PEX2P28328 305 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 GPR4P46093 362 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 RPS5P46782 204 aaKnown RBP14.87□□□□□ -0.03
SHOX-201ENST00000334060 SRYQ05066 204 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 SLC25A53Q5H9E4 307 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 ULK3Q6PHR2 472 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 SLC22A16Q86VW1 577 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 GTPBP8Q8N3Z3 284 aaPredicted RBP14.87□□□□□ -0.03
SHOX-201ENST00000334060 FAM109AQ8N4B1 249 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 SFXN2Q96NB2 322 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 ALPK1Q96QP1 1244 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 SLC29A1Q99808 456 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 NIPSNAP1Q9BPW8 284 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 PTDSS2Q9BVG9 487 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 DNAJB9Q9UBS3 223 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 RAB26Q9ULW5 256 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 BMP7P18075 431 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 PDK3Q15120 406 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 ZER1Q7Z7L7 766 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 GGNQ86UU5 652 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 OR4K5Q8NGD3 323 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 ST8SIA1Q92185 356 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 TAAR8Q969N4 342 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 SLC35B4Q969S0 331 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 FAM46AQ96IP4 442 aaKnown RBP14.87□□□□□ -0.03
SHOX-201ENST00000334060 C6orf203Q9P0P8 240 aaPredicted RBP14.87□□□□□ -0.03
SHOX-201ENST00000334060 CHRNA9Q9UGM1 479 aa14.87□□□□□ -0.03
SHOX-201ENST00000334060 A0A0J9YW62 118 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 A0A1B0GTH9 108 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 A0A1W2PRQ8 180 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 SH3PXD2BA1X283 911 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 ELOA3DA6NLF2 546 aaPredicted RBP14.86□□□□□ -0.03
SHOX-201ENST00000334060 SOCS2O14508 198 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 GNGT2O14610 69 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 HNRNPRO43390 633 aaKnown RBP14.86□□□□□ -0.03
SHOX-201ENST00000334060 RAMP1O60894 148 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 MITFO75030 526 aaPredicted RBP14.86□□□□□ -0.03
SHOX-201ENST00000334060 TNFAIP8O95379 198 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 CLPTM1O96005 669 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 LDLRP01130 860 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 POLR2HP52434 150 aaKnown RBP14.86□□□□□ -0.03
SHOX-201ENST00000334060 ALDH6A1Q02252 535 aaKnown RBP14.86□□□□□ -0.03
SHOX-201ENST00000334060 ST3GAL3Q11203 375 aa14.86□□□□□ -0.03
SHOX-201ENST00000334060 DGCR6Q14129 220 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms