RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 CPEB2Q7Z5Q1 589 aaKnown RBP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 LRRC17Q8N6Y2 441 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 OR52E2Q8NGJ4 325 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 OR5W2Q8NH69 310 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 NUBPLQ8TB37 319 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 LIPHQ8WWY8 451 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 HCAR1Q9BXC0 346 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 ASPNQ9BXN1 380 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 NXF2Q9GZY0 626 aaKnown RBP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 ADAM19Q9H013 955 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 GPN3Q9UHW5 284 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 CAB39Q9Y376 341 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 NPFFR2Q9Y5X5 522 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 DAPL1A0PJW8 107 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 CCDC182A6NF36 153 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 MCIDASD6RGH6 385 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 ZNF670-ZNF695F2Z2N8 137 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 J3QRE1 110 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 WWP2O00308 870 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 SLC30A4O14863 429 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 SCO2O43819 266 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 FADS1O60427 444 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 CDC40O60508 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 CXCR1P25024 350 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 INAQ16352 499 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 ZNF74Q16587 644 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 MISPQ8IVT2 679 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 APCDD1LQ8NCL9 501 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 OR5L2Q8NGL0 311 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 DEPDC7Q96QD5 511 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 CTRCQ99895 268 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 C6orf62Q9GZU0 229 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 NANSQ9NR45 359 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 HAO2Q9NYQ3 351 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 NXT1Q9UKK6 140 aaKnown RBP12.76□□□□□ -0.37
TRAIP-201ENST00000331456 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
TRAIP-201ENST00000331456 SEC16AO15027 2179 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 C12orf71A8MTZ7 269 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 LRRN3E7EW58 273 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 ARPC3O15145 178 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 LDOC1O95751 146 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-201ENST00000331456 SLC2A5P22732 501 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 P2RX1P51575 399 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 RPS4XP62701 263 aaKnown RBP12.75□□□□□ -0.37
TRAIP-201ENST00000331456 LGALS3BPQ08380 585 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 LPAL2Q16609 132 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 LCN1P1Q5VSP4 162 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 ZNF322Q6U7Q0 402 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-201ENST00000331456 CYB561A3Q8NBI2 242 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 ZNF485Q8NCK3 441 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 OR4K13Q8NH42 304 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 OR8K3Q8NH51 312 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 SPRYD4Q8WW59 207 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-201ENST00000331456 TM9SF4Q92544 642 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 KISS1RQ969F8 398 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-201ENST00000331456 CDADC1Q9BWV3 514 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 PEX16Q9Y5Y5 336 aa12.75□□□□□ -0.37
TRAIP-201ENST00000331456 TRBV11-1A0A0K0K1C0 115 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ZC3H12DA2A288 527 aaKnown RBP12.74□□□□□ -0.37
TRAIP-201ENST00000331456 PLD2O14939 933 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 KHNYNO15037 678 aaKnown RBP12.74□□□□□ -0.37
TRAIP-201ENST00000331456 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 KLK3P07288 261 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-201ENST00000331456 BMP4P12644 408 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 HIST1H1CP16403 213 aaKnown RBP12.74□□□□□ -0.37
TRAIP-201ENST00000331456 MST1P26927 711 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 GABRA5P31644 462 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 IDUAP35475 653 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 SLC26A5P58743 744 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ACTC1P68032 377 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ACTA1P68133 377 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 BDH1Q02338 343 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ZFP36L1Q07352 338 aaKnown RBP12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ZNF791Q3KP31 576 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-201ENST00000331456 TMEM205Q6UW68 189 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 B3GLCTQ6Y288 498 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 IGFN1Q86VF2 1251 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 MFSD4AQ8N468 514 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 OR10H4Q8NGA5 316 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 B4GALNT2Q8NHY0 566 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 FNDC8Q8TC99 324 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 TMCO6Q96DC7 493 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 C1GALT1C1Q96EU7 318 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 GPX7Q96SL4 187 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-201ENST00000331456 SPSB2Q99619 263 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ZNF649Q9BS31 505 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 RTN4RQ9BZR6 473 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 WDR54Q9H977 334 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 MMP25Q9NPA2 562 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 NRIP3Q9NQ35 241 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 TOR4AQ9NXH8 423 aa12.74□□□□□ -0.37
TRAIP-201ENST00000331456 CRNNQ9UBG3 495 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms