RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 PISDQ9UG56 409 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 SLC35A3Q9Y2D2 325 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 TCF20Q9UGU0 1960 aaKnown RBP14.78□□□□□ -0.04
SYNM-201ENST00000328642 GABRPO00591 440 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 GDI2P50395 445 aaKnown RBP14.78□□□□□ -0.04
SYNM-201ENST00000328642 NIPAL1Q6NVV3 410 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 CAMKMTQ7Z624 323 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 BEST4Q8NFU0 473 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 GOT1L1Q8NHS2 421 aaPredicted RBP14.78□□□□□ -0.04
SYNM-201ENST00000328642 DNAJA4Q8WW22 397 aaPredicted RBP14.78□□□□□ -0.04
SYNM-201ENST00000328642 GHSRQ92847 366 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 MUTYHQ9UIF7 546 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 CUL9Q8IWT3 2517 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 ZNF318Q5VUA4 2279 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 CDHR4A6H8M9 788 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 METTL12A8MUP2 240 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 SELENOFO60613 162 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 CPNE6O95741 557 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 CAPZBP47756 277 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 COL13A1Q5TAT6 717 aaPredicted RBP14.78□□□□□ -0.04
SYNM-201ENST00000328642 VASNQ6EMK4 673 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 SLC35F2Q8IXU6 374 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 ZBTB8BQ8NAP8 495 aaPredicted RBP14.78□□□□□ -0.04
SYNM-201ENST00000328642 GPR119Q8TDV5 335 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 NEK7Q8TDX7 302 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 NR4A3Q92570 626 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 EDAQ92838 391 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 NXPE2Q96DL1 559 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 GINS4Q9BRT9 223 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 PTGES2Q9H7Z7 377 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 LHX9Q9NQ69 397 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 PRDM6Q9NQX0 595 aa14.78□□□□□ -0.04
SYNM-201ENST00000328642 EFCAB7A8K855 629 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 ZNF879B4DU55 563 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 SHISA8B8ZZ34 492 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 H0YC42 278 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 RAB3BP20337 219 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 MVDP53602 400 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 POU3F1Q03052 451 aaPredicted RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 ZNF425Q6IV72 752 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 KIRREL2Q6UWL6 708 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 PHC2Q8IXK0 858 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 LRRC56Q8IYG6 542 aaPredicted RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 TOR1AIP2Q8NFQ8 470 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 WDR34Q96EX3 536 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 FRMD6Q96NE9 622 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 ISG20L2Q9H9L3 353 aaKnown RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 NUFIP1Q9UHK0 495 aaKnown RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 ALOX12BO75342 701 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 SNRPBP14678 240 aaKnown RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 CTBP2P56545 445 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 SNRPD2P62316 118 aaKnown RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 CCDC92Q53HC0 331 aaPredicted RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 LYPD4Q6UWN0 246 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 TRMT10AQ8TBZ6 339 aaKnown RBP14.77□□□□□ -0.04
SYNM-201ENST00000328642 GPA33Q99795 319 aa14.77□□□□□ -0.04
SYNM-201ENST00000328642 VSTM2BA6NLU5 285 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 ORC5O43913 435 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 SERPINA3P01011 423 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 LINC00271P0C7V0 271 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 CTF1Q16619 201 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 LAIR1Q6GTX8 287 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 CELF2-AS1Q8N7Q2 184 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 STT3BQ8TCJ2 826 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 TMEM234Q8WY98 164 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 TRPV4Q9HBA0 871 aa14.77□□□□□ -0.05
SYNM-201ENST00000328642 ZNF346Q9UL40 294 aaKnown RBP14.77□□□□□ -0.05
SYNM-201ENST00000328642 IGHV1OR15-9A0A0B4J2B8 117 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 CDC42EP2O14613 210 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 SMAD4Q13485 552 aaKnown RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 MAMDC2Q7Z304 686 aaPredicted RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 RDH10Q8IZV5 341 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 DUSP22Q9NRW4 184 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 TMEM74BQ9NUR3 256 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 EPHA6Q9UF33 1036 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 SUSD2Q9UGT4 822 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 POMT2Q9UKY4 750 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 PRUNE2Q8WUY3 3088 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 A0A0B4J203 849 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 M0R082 166 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 SYT5O00445 386 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 UPK1BO75841 260 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 RGS9O75916 674 aaPredicted RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 HIST1H1CP16403 213 aaKnown RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 MAGEB1P43366 347 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 ACY1Q03154 408 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 C6orf183Q5T699 404 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 ZNF322Q6U7Q0 402 aaPredicted RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 ESPNLQ6ZVH7 1005 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 SYT13Q7L8C5 426 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 LINC00346Q8IVM7 164 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 RBM12BQ8IXT5 1001 aaKnown RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 SLC22A18ASQ8N1D0 253 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 OR2T4Q8NH00 348 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 FUZQ9BT04 418 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 DKKL1Q9UK85 242 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 INMT-MINDY4F8WBC2 141 aa14.76□□□□□ -0.05
SYNM-201ENST00000328642 TLX3O43711 291 aaPredicted RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 JUNBP17275 347 aaPredicted RBP14.76□□□□□ -0.05
SYNM-201ENST00000328642 RELAQ04206 551 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms