RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ARPC3O15145 178 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 PGDP52209 483 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 CLDN20P56880 219 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 SRSF5Q13243 272 aaKnown RBP20.51■□□□□ 0.87
PNKP-201ENST00000322344 PON3Q15166 354 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 Q6ZS52 159 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 ZNF615Q8N8J6 731 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 GHSRQ92847 366 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 ZMYND19Q96E35 227 aaPredicted RBP20.51■□□□□ 0.87
PNKP-201ENST00000322344 RNF31Q96EP0 1072 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 NUFIP1Q9UHK0 495 aaKnown RBP20.51■□□□□ 0.87
PNKP-201ENST00000322344 A0A0G2JK05 382 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 MCIDASD6RGH6 385 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 OR7A10O76100 309 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 RPL4P36578 427 aaKnown RBP20.51■□□□□ 0.87
PNKP-201ENST00000322344 ACVR1BP36896 505 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 GABRA4P48169 554 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 ERV3-1Q14264 604 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 TCTE1Q5JU00 501 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 SSX6Q7RTT6 188 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 GKN2Q86XP6 184 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 OR7G1Q8NGA0 311 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 UBASH3BQ8TF42 649 aa20.51■□□□□ 0.87
PNKP-201ENST00000322344 MMABQ96EY8 250 aaPredicted RBP20.51■□□□□ 0.87
PNKP-201ENST00000322344 A0A0G2JMP0 313 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 A0A0X1KG70 313 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 GNB5O14775 395 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 IGF2P01344 180 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 TFP02787 698 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 IFNA16P05015 189 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 MAOAP21397 527 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 DIO1P49895 249 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 MRPS15P82914 257 aaKnown RBP20.5■□□□□ 0.87
PNKP-201ENST00000322344 DBPQ10586 325 aaPredicted RBP20.5■□□□□ 0.87
PNKP-201ENST00000322344 CDONQ4KMG0 1287 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 FAM27D1Q5T7N8 215 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 HACD4Q5VWC8 232 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 ZNF57Q68EA5 555 aaPredicted RBP20.5■□□□□ 0.87
PNKP-201ENST00000322344 SYT13Q7L8C5 426 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 SLC35F2Q8IXU6 374 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 SAMD12Q8N8I0 201 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 Q8N9G6 341 aaPredicted RBP20.5■□□□□ 0.87
PNKP-201ENST00000322344 OR4M2Q8NGB6 313 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 OR4C3Q8NH37 302 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 OR14A16Q8NHC5 309 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 SMIM19Q96E16 107 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 SLC38A3Q99624 504 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 REV3LO60673 3130 aa20.5■□□□□ 0.87
PNKP-201ENST00000322344 H0YIG0 161 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 SLC43A1O75387 559 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 RAB3BP20337 219 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 ADH7P40394 386 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 PITPNBP48739 271 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 PRPS1P60891 318 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 CDK5R1Q15078 307 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 TATDN3Q17R31 274 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 TP53I3Q53FA7 332 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 KLHL26Q53HC5 615 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 RPTNQ6XPR3 784 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 OR4M1Q8NGD0 313 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 SMAP2Q8WU79 429 aaPredicted RBP20.49■□□□□ 0.87
PNKP-201ENST00000322344 C3orf49Q96BT1 292 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 MARVELD1Q9BSK0 173 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 MFRPQ9BY79 579 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 CHRNA10Q9GZZ6 450 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 HDHD2Q9H0R4 259 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 A8MV72 311 aaPredicted RBP20.49■□□□□ 0.87
PNKP-201ENST00000322344 ORC5O43913 435 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 ARL6IP5O75915 188 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 EIF4EP06730 217 aaKnown RBP20.49■□□□□ 0.87
PNKP-201ENST00000322344 ALAS2P22557 587 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 HSF2Q03933 536 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 NNATQ16517 81 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 NDUFAF6Q330K2 333 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 PYHIN1Q6K0P9 492 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 RPL22L1Q6P5R6 122 aaKnown RBP20.49■□□□□ 0.87
PNKP-201ENST00000322344 FAM71CQ8NEG0 241 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 OR51Q1Q8NH59 317 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 TRMT10AQ8TBZ6 339 aaKnown RBP20.49■□□□□ 0.87
PNKP-201ENST00000322344 RFT1Q96AA3 541 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 PELI1Q96FA3 418 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 DMRTB1Q96MA1 342 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 GPX7Q96SL4 187 aaPredicted RBP20.49■□□□□ 0.87
PNKP-201ENST00000322344 NRIP3Q9NQ35 241 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 SLC2A4RGQ9NR83 387 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 NLKQ9UBE8 527 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 TMEM131Q92545 1883 aa20.49■□□□□ 0.87
PNKP-201ENST00000322344 ZNF217O75362 1048 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 GATBO75879 557 aaKnown RBP20.48■□□□□ 0.87
PNKP-201ENST00000322344 YES1P07947 543 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 PNMTP11086 282 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 GDI2P50395 445 aaKnown RBP20.48■□□□□ 0.87
PNKP-201ENST00000322344 OR10A3P58181 314 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 RPS4XP62701 263 aaKnown RBP20.48■□□□□ 0.87
PNKP-201ENST00000322344 IL10RAQ13651 578 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 CCDC58Q4VC31 144 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 SLITRK4Q8IW52 837 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 LRRC17Q8N6Y2 441 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 ZNF527Q8NB42 609 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 NPEPL1Q8NDH3 523 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms