RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 HSPB3Q12988 150 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 CMTM4Q8IZR5 234 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 ABHD4Q8TB40 342 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 DERL3Q96Q80 235 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 GAL3ST1Q99999 423 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 PLAGL1Q9UM63 463 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 DENND4AQ7Z401 1863 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 PTPRDP23468 1912 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 AGPAT2O15120 278 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 TGM5O43548 720 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 LBX1P52954 281 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 PSMD4P55036 377 aaKnown RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 PPIAP62937 165 aaKnown RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 NTHL1P78549 312 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 CHAF1BQ13112 559 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 ZNF234Q14588 700 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 GTPBP8Q8N3Z3 284 aaPredicted RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 OR2AK2Q8NG84 335 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 OR10H5Q8NGA6 315 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 CYB5D2Q8WUJ1 264 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 ANKRD36A6QL64 1941 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 SPEGQ15772 3267 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 ANTXRLA6NF34 631 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 RTCAO00442 366 aaKnown RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 SYT5O00445 386 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 NME1P15531 152 aaKnown RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 ABCD3P28288 659 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 GPR4P46093 362 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 HYAL4Q2M3T9 481 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 PLEKHN1Q494U1 663 aaPredicted RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 ETV3LQ6ZN32 361 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 SLC39A11Q8N1S5 342 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 TMEM99Q8N816 258 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 ZNF740Q8NDX6 193 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 OR10R2Q8NGX6 335 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 RNASE11Q8TAA1 199 aaKnown RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 TMEM38AQ9H6F2 299 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 COMMD9Q9P000 198 aa13.9□□□□□ -0.18
SCAP-202ENST00000320017 STOX2Q9P2F5 926 aaPredicted RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 LSM7Q9UK45 103 aaKnown RBP13.9□□□□□ -0.18
SCAP-202ENST00000320017 MEIS3P1A6NDR6 274 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 OR2A4O95047 310 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 SLC16A8O95907 504 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 ATP1B1P05026 303 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 MGMTP16455 207 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 CPT2P23786 658 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 MPGP29372 298 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 MAT2AP31153 395 aaKnown RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 TIA1P31483 386 aaKnown RBP eCLIP13.89□□□□□ -0.191e-5■□□□□ 11
SCAP-202ENST00000320017 RIDAP52758 137 aaKnown RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 OR52W1Q6IF63 320 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 FIGNL1Q6PIW4 674 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 TPRA1Q86W33 373 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 THOC6Q86W42 341 aaKnown RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 C17orf47Q8NEP4 570 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 FATE1Q969F0 183 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 OR2A7Q96R45 310 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 VRK1Q99986 396 aaPredicted RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 WDR13Q9H1Z4 485 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 CACYBPQ9HB71 228 aaKnown RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 FBXL3Q9UKT7 428 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 URADA6NGE7 173 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 IGSF6O95976 241 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 VSIG10L2P0DP72 767 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 NR2F1P10589 423 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 TAS2R41P59536 307 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 ECH1Q13011 328 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 ASPGQ86U10 573 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 ARMC10Q8N2F6 343 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 STOML3Q8TAV4 291 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 BRIX1Q8TDN6 353 aaKnown RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 BADQ92934 168 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 RAD51AP1Q96B01 352 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 SLC25A18Q9H1K4 315 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 SLC13A4Q9UKG4 626 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 ALPPL2P10696 532 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 CPN1P15169 458 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 TMEM69Q5SWH9 247 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 MUC20Q8N307 709 aaPredicted RBP13.89□□□□□ -0.19
SCAP-202ENST00000320017 CPXM2Q8N436 756 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 DNAAF1Q8NEP3 725 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 SEC22AQ96IW7 307 aa13.89□□□□□ -0.19
SCAP-202ENST00000320017 TSPAN6O43657 245 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 SNAPC5O75971 98 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 APEHP13798 732 aaKnown RBP13.88□□□□□ -0.19
SCAP-202ENST00000320017 LAG3P18627 525 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 SDHAP31040 664 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 PRKAG1P54619 331 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 PCBP3P57721 371 aaKnown RBP13.88□□□□□ -0.19
SCAP-202ENST00000320017 NDUFA9Q16795 377 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 PRICKLE2Q7Z3G6 844 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 ANKRD33Q7Z3H0 272 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 ARL11Q969Q4 196 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 LCORQ96JN0 433 aaPredicted RBP13.88□□□□□ -0.19
SCAP-202ENST00000320017 IL17FQ96PD4 163 aa13.88□□□□□ -0.19
SCAP-202ENST00000320017 RPS10P5Q9NQ39 176 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms