RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SMIM11AP58511 58 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 ST3GAL3Q11203 375 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 EXOC3L2Q2M3D2 409 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 GLYR1Q49A26 553 aaPredicted RBP20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 TMEM255BQ8WV15 326 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 SMPDL3BQ92485 455 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 SLC38A4Q969I6 547 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 PIGQQ9BRB3 760 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 EXO5Q9H790 373 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 KIF17Q9P2E2 1029 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNF407Q9C0G0 2248 aa20.23■□□□□ 0.83
CCDC85B-201ENST00000312579 TRBV4-1A0A0J9YWV2 114 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ZC3H12DA2A288 527 aaKnown RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ELOA3DA6NLF2 546 aaPredicted RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 DLGAP1O14490 977 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 SUSD5O60279 629 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 CRYABP02511 175 aaKnown RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 CXCR1P25024 350 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 MED21Q13503 144 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ELOA3BQ3SY89 546 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 FGD3Q5JSP0 725 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 DCST1Q5T197 706 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ELOA3Q8NG57 546 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 GIPC3Q8TF64 312 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 NR4A3Q92570 626 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 DHRS1Q96LJ7 313 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 BBC3Q96PG8 261 aaPredicted RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 OR11A1Q9GZK7 315 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 POLR2J2Q9GZM3 115 aaKnown RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 POLR2J3Q9H1A7 115 aaKnown RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ASF1BQ9NVP2 202 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 SPRR3Q9UBC9 169 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ORC6Q9Y5N6 252 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 IGKV1D-42A0A075B6H8 117 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 A0A087WUJ7 227 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 TRGV5A0A0B4J1U4 118 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ATXN7O15265 892 aaPredicted RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNF17P17021 662 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ADH6P28332 368 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 APOBEC1P41238 236 aaKnown RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 HTR3AP46098 478 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 TRAM2Q15035 370 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 SEC23BQ15437 767 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 NHSL2Q5HYW2 709 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 C1QL3Q5VWW1 255 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ZNF324BQ6AW86 544 aaPredicted RBP20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 LINC00114Q6XXX2 140 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 NEIL3Q8TAT5 605 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 RDH12Q96NR8 316 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 ADI1Q9BV57 179 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 CHRNA9Q9UGM1 479 aa20.22■□□□□ 0.83
CCDC85B-201ENST00000312579 TTLL8A6PVC2 850 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 H0YC42 278 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 KPNA4O00629 521 aaPredicted RBP20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 DENRO43583 198 aaKnown RBP20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 PIP5K1CO60331 668 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 CCNB2O95067 398 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 SNAP29O95721 258 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 IGFBP5P24593 272 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 IFNA8P32881 189 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 SFTPDP35247 375 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 LIMS1P48059 325 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 HMGA2P52926 109 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 UGT2B15P54855 530 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 MLLT10P55197 1068 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 TPD52P55327 224 aaPredicted RBP20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 C19orf57Q0VDD7 668 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 MICAQ29983 383 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 ANKRD34AQ69YU3 496 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 PODNL1Q6PEZ8 512 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 MEX3DQ86XN8 651 aaKnown RBP20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 DHRSXQ8N5I4 330 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 ATG16L2Q8NAA4 619 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 OR10G2Q8NGC3 310 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 SLC7A13Q8TCU3 470 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 FAR1Q8WVX9 515 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 DTNBP1Q96EV8 351 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 ALPK1Q96QP1 1244 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 TMCC3Q9ULS5 477 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 SPTA1P02549 2419 aa20.21■□□□□ 0.83
CCDC85B-201ENST00000312579 A0A1W2PRQ8 180 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 IGHG3P01860 377 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 RPSAP08865 295 aaKnown RBP20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 PNMTP11086 282 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 BMP7P18075 431 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 RAD23AP54725 363 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 EGR4Q05215 589 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 DGCR6Q14129 220 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 RFX4Q33E94 735 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 SWT1Q5T5J6 900 aaKnown RBP20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 PFN4Q8NHR9 129 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 CYGBQ8WWM9 190 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 FUZQ9BT04 418 aa20.2■□□□□ 0.82
CCDC85B-201ENST00000312579 DNAJC13O75165 2243 aa20.19■□□□□ 0.82
CCDC85B-201ENST00000312579 A0A087WUU8 490 aa20.19■□□□□ 0.82
CCDC85B-201ENST00000312579 DAPP51397 102 aa20.19■□□□□ 0.82
CCDC85B-201ENST00000312579 CLDN20P56880 219 aa20.19■□□□□ 0.82
CCDC85B-201ENST00000312579 SELENBP1Q13228 472 aa20.19■□□□□ 0.82
CCDC85B-201ENST00000312579 C3AR1Q16581 482 aa20.19■□□□□ 0.82
CCDC85B-201ENST00000312579 ZIK1Q3SY52 487 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms