RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 GHSRQ92847 366 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 OR5M11Q96RB7 305 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 SCN7AQ01118 1682 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 TMEM129A0AVI4 362 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 POM121CA8CG34 1229 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 FBXO45P0C2W1 286 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 HOXC13P31276 330 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 MBTPS1Q14703 1052 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 SYPL1Q16563 259 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 C20orf85Q9H1P6 137 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 PRSS21Q9Y6M0 314 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 SLC9B1P1A6NJY1 282 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 SGCEO43556 437 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 APEX1P27695 318 aaKnown RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 NTSR1P30989 418 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 PRKAR1BP31321 381 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 VEGFCP49767 419 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 RPL23AP62750 156 aaKnown RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 SEMA3BQ13214 749 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 RAET1LQ5VY80 246 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 HSD11B1LQ7Z5J1 315 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 Q8N9G6 341 aaPredicted RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 OLIG1Q8TAK6 271 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 TM9SF4Q92544 642 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 CNTNAP3Q9BZ76 1288 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 FBXO7Q9Y3I1 522 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 SCN8AQ9UQD0 1980 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 TOR1AO14656 332 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 GPLD1P80108 840 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 P2RY14Q15391 338 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 MPEG1Q2M385 716 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 CD163Q86VB7 1156 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 AMIGO3Q86WK7 504 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 MEX3DQ86XN8 651 aaKnown RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 DNAJA3Q96EY1 480 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 CDCA4Q9BXL8 241 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 INIPQ9NRY2 104 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 THEGLP0DJG4 465 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 FXYD4P59646 89 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 MYEF2Q9P2K5 600 aaKnown RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 ANKRD34BA5PLL1 514 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 MEIS3P1A6NDR6 274 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 MED6O75586 246 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 ZNF865P0CJ78 1059 aaPredicted RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 PRDX1Q06830 199 aaKnown RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 GABARAPL1Q9H0R8 117 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 DUSP21Q9H596 190 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 GFOD1Q9NXC2 390 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 NPFFR2Q9Y5X5 522 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 CLLU1OSQ5K130 101 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 VRK2Q86Y07 508 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 LGALS14Q8TCE9 139 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 TOMM40LQ969M1 308 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 GPR78Q96P69 363 aa12.29□□□□□ -0.44
SNED1-201ENST00000310397 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
SNED1-201ENST00000310397 SCN4AP35499 1836 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 SERPINE2P07093 398 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 CPEP16870 476 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 YIF1BQ5BJH7 314 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 RAB9BQ9NP90 201 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 YARS2Q9Y2Z4 477 aaKnown RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 K7EPK0 472 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 GFRA2O00451 464 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 TGM5O43548 720 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 GPR137BO60478 399 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 TACR1P25103 407 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 CTHP32929 405 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 PLA2G7Q13093 441 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 ARPC5LQ9BPX5 153 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 ZNF160Q9HCG1 818 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 UBQLN4Q9NRR5 601 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 HEPACAM2A8MVW5 462 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 DEFA6Q01524 100 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 HTR4Q13639 388 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 HNRNPA1L2Q32P51 320 aaKnown RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 TBPL2Q6SJ96 375 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 BOLLQ8N9W6 283 aaKnown RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 GSX2Q9BZM3 304 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 PRMT8Q9NR22 394 aaPredicted RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 C1orf123Q9NWV4 160 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 GPR176Q14439 515 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 PAQR9Q6ZVX9 377 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 RTL10Q7L3V2 364 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 SLC2A12Q8TD20 617 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 TSACCQ96A04 125 aaPredicted RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 SORBS1Q9BX66 1292 aaKnown RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 PLEKHA3Q9HB20 300 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 REV1Q9UBZ9 1251 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 APOBEC3BQ9UH17 382 aaKnown RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 CPMP14384 443 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 MCCD1P59942 119 aaPredicted RBP12.28□□□□□ -0.44
SNED1-201ENST00000310397 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 PIGMQ9H3S5 423 aa12.28□□□□□ -0.44
SNED1-201ENST00000310397 A0A0J9YY10 115 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms