RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MEGF11A6BM72 1044 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 DVL2O14641 736 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 HOXB5P09067 269 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 ARSBP15848 533 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 THBS2P35442 1172 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 P2RY2P41231 377 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 MLLT11Q13015 90 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 PIN1Q13526 163 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 ZNF765Q7L2R6 523 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 MEX3DQ86XN8 651 aaKnown RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 CYB561A3Q8NBI2 242 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 CLEC1AQ8NC01 280 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 RCBTB1Q8NDN9 531 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 OR2A12Q8NGT7 310 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 APIPQ96GX9 242 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 C2orf42Q9NWW7 574 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 LRIT1Q9P2V4 623 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 SLC7A7Q9UM01 511 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 V9GY05 133 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 FZD7O75084 574 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 CLEC3AO75596 197 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 CDC123O75794 336 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 SIX6O95475 246 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 SERPINA5P05154 406 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 NME2P22392 152 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 HLA-FP30511 346 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 RPL23AP62750 156 aaKnown RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 SMN1Q16637 294 aaKnown RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 VASNQ6EMK4 673 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 PGM2L1Q6PCE3 622 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 METTL27Q8N6F8 245 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 DUSP19Q8WTR2 217 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 DDX31Q9H8H2 851 aaKnown RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 GALNT9Q9HCQ5 603 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 MYH10P35580 1976 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 DDX60LQ5H9U9 1706 aaKnown RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 A0A1B0GUL6 1792 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 A0A087WZY1 265 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 PPP1R2P9O14990 202 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 APOA2P02652 100 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 KCNJ5P48544 419 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 CTXN1P60606 82 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 TBPL1P62380 186 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 GPR50Q13585 617 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 FCN2Q15485 313 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 CDKN3Q16667 212 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 PSAPL1Q6NUJ1 521 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 FAM122BQ7Z309 247 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 ISCA2Q86U28 154 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 CHST14Q8NCH0 376 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 SLC30A7Q8NEW0 376 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 OR7G3Q8NG95 312 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 MITD1Q8WV92 249 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 SLC35B4Q969S0 331 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 TXNDC15Q96J42 360 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 C4orf36Q96KX1 117 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 ZNF300Q96RE9 604 aaPredicted RBP7.65□□□□□ -1.19
VPS41-202ENST00000310301 NKX6-2Q9C056 277 aaPredicted RBP7.65□□□□□ -1.19
VPS41-202ENST00000310301 RNF32Q9H0A6 362 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 SLC25A31Q9H0C2 315 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 PRTFDC1Q9NRG1 225 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 PRODH2Q9UF12 536 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 PURGQ9UJV8 347 aaKnown RBP7.65□□□□□ -1.19
VPS41-202ENST00000310301 PCDHA9Q9Y5H5 950 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 WASH4PA8MWX3 477 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 NPIPA7E9PJI5 369 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 NPIPA8P0DM63 369 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 TCN2P20062 427 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 FBLP22087 321 aaKnown RBP7.65□□□□□ -1.19
VPS41-202ENST00000310301 PCGF2P35227 344 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 EPHA5P54756 1037 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 TAS2R38P59533 333 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 TAS2R19P59542 299 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 ZP2Q05996 745 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 RAB31Q13636 194 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 GLB1L2Q8IW92 636 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 CMIPQ8IY22 773 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 CMTM1Q8IZ96 169 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 GPR148Q8TDV2 347 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 ADAMTS14Q8WXS8 1223 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 TAAR8Q969N4 342 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 ZNF778Q96MU6 729 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 PKMYT1Q99640 499 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 KCNIP1Q9NZI2 227 aa7.65□□□□□ -1.19
VPS41-202ENST00000310301 GABRPO00591 440 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 GPR37L1O60883 481 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 ITGB2P05107 769 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 PLA2G7Q13093 441 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 EIF3IQ13347 325 aaKnown RBP7.64□□□□□ -1.19
VPS41-202ENST00000310301 IER5LQ5T953 404 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 FAM180BQ6P0A1 224 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 LYSMD2Q8IV50 215 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 PLPP6Q8IY26 295 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 SLC2A12Q8TD20 617 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 RSC1A1Q92681 617 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 LDAHQ9H6V9 325 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 NIPAL2Q9H841 368 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 EMC7Q9NPA0 242 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 PLEKHJ1Q9NW61 149 aa7.64□□□□□ -1.19
VPS41-202ENST00000310301 KIF25Q9UIL4 384 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms