RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ARHGDIBP52566 201 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 PON3Q15166 354 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ZNF658BQ4V348 819 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 RPL13AP3Q6NVV1 102 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 LSM14AQ8ND56 463 aaKnown RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 HSPA12BQ96MM6 686 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 CNN2Q99439 309 aaKnown RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 DPYSL5Q9BPU6 564 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 KCMF1Q9P0J7 381 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ACSL5Q9ULC5 683 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 HRH3Q9Y5N1 445 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 SCN2AQ99250 2005 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 A0A1W2PPV9 198 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ANKRD61A6NGH8 418 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ANXA2P2A6NMY6 339 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 FAM171A2A8MVW0 826 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 GABARAPH6UMI1 98 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 PEX12O00623 359 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 GOSR2O14653 212 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ITGA10O75578 1167 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 IFNGR1P15260 489 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 NT5EP21589 574 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 SLC6A6P31641 620 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 SEC61A1P61619 476 aaKnown RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ACTA2P62736 377 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ACTG2P63267 376 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 GK2Q14410 553 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 CDK5R1Q15078 307 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 C4orf46Q504U0 113 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 TCEAL5Q5H9L2 206 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 WDR88Q6ZMY6 472 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 KCT2Q8NC54 265 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 OR8K3Q8NH51 312 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ST8SIA2Q92186 375 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 CNOT9Q92600 299 aaKnown RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 KISS1RQ969F8 398 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 SMIM19Q96E16 107 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 PELI1Q96FA3 418 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 INSM2Q96T92 566 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-201ENST00000309017 ZNF559Q9BR84 538 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 GPR174Q9BXC1 333 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 IFT46Q9NQC8 304 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 PRDM7Q9NQW5 492 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 KCNMB2Q9Y691 235 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 RNF215Q9Y6U7 377 aa10.3□□□□□ -0.76
PTPN7-201ENST00000309017 TRAV1-2A0A0B4J238 106 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 MCRIP1C9JLW8 97 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 KLF4O43474 513 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 AGR2O95994 175 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ICAM2P13598 275 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ZNF35P13682 527 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 SRMP19623 302 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 AK4P27144 223 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 FAUP35544 74 aaKnown RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 STARP49675 285 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 BAMBIQ13145 260 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ODF4Q2M2E3 257 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 NHLRC3Q5JS37 347 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 METRNLQ641Q3 311 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 GSG1LQ6UXU4 331 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 TMUB2Q71RG4 321 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 PXKQ7Z7A4 578 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ASPGQ86U10 573 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 SLC35F2Q8IXU6 374 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 OR2A1Q8NGT9 310 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 SCARB1Q8WTV0 552 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 WDR89Q96FK6 387 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 MRPL48Q96GC5 212 aaKnown RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ZNF764Q96H86 408 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ZNF578Q96N58 590 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 TIMP4Q99727 224 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 AICDAQ9GZX7 198 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 SYNPO2LQ9H987 977 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 HCFC2Q9Y5Z7 792 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 KIAA1671Q9BY89 1806 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 TBC1D3EA0A087X179 549 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 J3QRE1 110 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 NMBP08949 121 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 HLXQ14774 488 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 DHCR24Q15392 516 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 DEFB134Q4QY38 66 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 GLDNQ6ZMI3 551 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ERN2Q76MJ5 926 aaKnown RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 OR5M1Q8NGP8 315 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 CD99L2Q8TCZ2 262 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 GAL3ST1Q99999 423 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 JAM3Q9BX67 310 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 PITHD1Q9GZP4 211 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 MCCC2Q9HCC0 563 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 REV3LO60673 3130 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 TBC1D3KA0A087X1G2 549 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 OR6C74A6NCV1 312 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 MEIS3P1A6NDR6 274 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 TBC1D3BA6NDS4 549 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 TBC1D3FA6NER0 549 aaPredicted RBP10.29□□□□□ -0.76
PTPN7-201ENST00000309017 TUBAL3A6NHL2 446 aa10.29□□□□□ -0.76
PTPN7-201ENST00000309017 ADH5P11766 374 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms