RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ADAP00813 363 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 THBS1P07996 1170 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 HTR3AP46098 478 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 ATP4BP51164 291 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 POLR2HP52434 150 aaKnown RBP17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 FADDQ13158 208 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 P2RY6Q15077 328 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 ACKR1Q16570 336 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 LIN52Q52LA3 116 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 ATG4DQ86TL0 474 aaPredicted RBP17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 COMTD1Q86VU5 262 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 CCDC103Q8IW40 242 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 SPDL1Q96EA4 605 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 INTS9Q9NV88 658 aaKnown RBP17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 CALML5Q9NZT1 146 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 CCDC167Q9P0B6 97 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 TMEM181Q9P2C4 612 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 TLN2Q9Y4G6 2542 aa17.54■□□□□ 0.4
PDZRN3-202ENST00000308537 NAV3Q8IVL0 2385 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 A0A0G2JPF8 293 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 HNRNPCL2B2RXH8 293 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 HNRNPCL3B7ZW38 293 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 HNRNPCL1O60812 293 aaKnown RBP17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 HNRNPCL4P0DMR1 293 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 TFPIP10646 304 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 CD99P14209 185 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 CCNA2P20248 432 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 FKBP2P26885 142 aaKnown RBP17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 ITGADQ13349 1161 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 PRAMEF8Q5VWM4 474 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 PRAMEF7Q5VXH5 474 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 WFDC8Q8IUA0 241 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 STEAP2Q8NFT2 490 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 LILRB1Q8NHL6 650 aaPredicted RBP17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 DYDC1Q8WWB3 177 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 PLPPR2Q96GM1 343 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 MAGEB18Q96M61 343 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 PIP5K1AQ99755 562 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 HDHD5Q9BXW7 423 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 FANCFQ9NPI8 374 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 TMEM45AQ9NWC5 275 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 NSD1Q96L73 2696 aaPredicted RBP17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 ZANQ9Y493 2812 aa17.53■□□□□ 0.4
PDZRN3-202ENST00000308537 UQCRHLA0A096LP55 91 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 NPIPB7O75200 414 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 IGHV1-2P23083 117 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 STX1BP61266 288 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 GNA13Q14344 377 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 DLEU7Q6UYE1 221 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 GALNT5Q7Z7M9 940 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 SERPINA11Q86U17 422 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 ZNF440Q8IYI8 595 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 SPATA9Q9BWV2 254 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 UBTD1Q9HAC8 227 aa17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 THUMPD1Q9NXG2 353 aaKnown RBP17.52■□□□□ 0.4
PDZRN3-202ENST00000308537 NIPBLQ6KC79 2804 aaeCLIP17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 PDLIM1O00151 329 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 NR5A2O00482 541 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 PGM3O95394 542 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 CNOT4O95628 575 aaKnown RBP17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 ARAFP10398 606 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 P2RY4P51582 365 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 MAP2K6P52564 334 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 FOXG1P55316 489 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF704Q6ZNC4 412 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 ALPK2Q86TB3 2170 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 KISS1RQ969F8 398 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 C3orf49Q96BT1 292 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 PRDM4Q9UKN5 801 aa17.51■□□□□ 0.39
PDZRN3-202ENST00000308537 TMEM229AB2RXF0 380 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 FRS3O43559 492 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 EDF1O60869 148 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 FZD7O75084 574 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 LYZL6O75951 148 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 FPR1P21462 350 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 OR2B6P58173 313 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 SQLEQ14534 574 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 ADRM1Q16186 407 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 AGKQ53H12 422 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 NCMAPQ5T1S8 102 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 C20orf204Q6ZNR8 217 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 BHLHA15Q7RTS1 189 aaPredicted RBP17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 LRRC75A-AS1Q8N1F1 130 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF433Q8N7K0 673 aaPredicted RBP17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 PIGXQ8TBF5 258 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 THOC1Q96FV9 657 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 POTEKPQ9BYX7 375 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 MALT1Q9UDY8 824 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 FLVCR1Q9Y5Y0 555 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 CSPG4Q6UVK1 2322 aa17.5■□□□□ 0.39
PDZRN3-202ENST00000308537 A0A1W2PP18 115 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 LIPT2A6NK58 231 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 ETS2P15036 469 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 GPX2P18283 190 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 IL32P24001 234 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 NR1H2P55055 460 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 SLC35A1P78382 337 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 IRX1P78414 480 aaPredicted RBP17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 EGR4Q05215 589 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 BNIP2Q12982 314 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms