RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SLC1A3P43003 542 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 ADIRFQ15847 76 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 Q6ZSR6 202 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 TMEM179BQ7Z7N9 219 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 SPTSSAQ969W0 71 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 BPIFA2Q96DR5 249 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 SFXN2Q96NB2 322 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 MRIQ9BWK5 157 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 PLIN4Q96Q06 1357 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 A8MXE2 369 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 H3BQ06 376 aaPredicted RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 SNAPC5O75971 98 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 HMGN2P05204 90 aaKnown RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 ZNF468Q5VIY5 522 aaPredicted RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 ANKRD34AQ69YU3 496 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 PGAP1Q75T13 922 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 SSX9Q7RTT3 188 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 PFN4Q8NHR9 129 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 DAZLQ92904 295 aaKnown RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 PTDSS2Q9BVG9 487 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 P2RY10O00398 339 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 HYAL3O43820 417 aaPredicted RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 CLEC3BP05452 202 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 FAM122CQ6P4D5 195 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 CMTM1Q8IZ96 169 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 OR10K1Q8NGX5 313 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 H1FXQ92522 213 aaKnown RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 SGPP1Q9BX95 441 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 LRIT1Q9P2V4 623 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 ZNF230Q9UIE0 474 aaPredicted RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 EMCNQ9ULC0 261 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 SULT2B1O00204 365 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 TNFRSF10AO00220 468 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 FOLR1P15328 257 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 RAB5CP51148 216 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 MAMDC4Q6UXC1 1216 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 PRICKLE2Q7Z3G6 844 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 BAGE2Q86Y30 109 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 CCDC71LQ8N9Z2 235 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 KDM1BQ8NB78 822 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 OR4M1Q8NGD0 313 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 OR5M11Q96RB7 305 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 ACOT13Q9NPJ3 140 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 RFXAPO00287 272 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 FECHP22830 423 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 AGFG1P52594 562 aaKnown RBP11.81□□□□□ -0.52
USP38-201ENST00000307017 SLC35A2P78381 396 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 ARHGAP11BQ3KRB8 267 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 STEAP3Q658P3 488 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 BPIFCQ8NFQ6 507 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 MOAP1Q96BY2 351 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 SEMA4CQ9C0C4 833 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 BANF2Q9H503 90 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 PCDHA9Q9Y5H5 950 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 ENPP4Q9Y6X5 453 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 TMEM72A0PK05 275 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ZNF593O00488 134 aaPredicted RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 CSO75390 466 aaKnown RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 ACTBP60709 375 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ACTG1P63261 375 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 EDDM3AQ14507 147 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 PIGTQ969N2 578 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 IGSF21Q96ID5 467 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ESRP2Q9H6T0 727 aaKnown RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 CALHM2Q9HA72 323 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 CBY3A6NI87 242 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ICMTO60725 284 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 SOD2P04179 222 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 POU3F1Q03052 451 aaPredicted RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 GPR17Q13304 367 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ETFRF1Q6IPR1 90 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 SLC43A2Q8N370 569 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 OR7G3Q8NG95 312 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 OR52E1Q8NGJ3 308 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 FBXW5Q969U6 566 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 MTHFD2LQ9H903 347 aaPredicted RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 GLTPQ9NZD2 209 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 TMPRSS11EQ9UL52 423 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 AQP7P3A6NL99 342 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ACOT7O00154 380 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 CEBPBP17676 345 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 NPY4RP50391 375 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 IDO2Q6ZQW0 420 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 OR10R2Q8NGX6 335 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 TMEM255BQ8WV15 326 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 RNF170Q96K19 258 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 DCLRE1CQ96SD1 692 aaKnown RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 SYT3Q9BQG1 590 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 BABAM2Q9NXR7 383 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 DHRS4L1P0CG22 281 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 CPOXP36551 454 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ERVFC1P60507 584 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 IKZF1Q13422 519 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 RAB33AQ14088 237 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 HSF5Q4G112 596 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms