RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CBX7O95931 251 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CKMT2P17540 419 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 EPHA1P21709 976 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 TNFRSF17Q02223 184 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 HNRNPA0Q13151 305 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 NKAIN1Q4KMZ8 207 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 XKR5Q6UX68 686 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 OR4K1Q8NGD4 311 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 OR1J4Q8NGS1 313 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF597Q96LX8 424 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 TTTY10Q9BZA0 68 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 TWSG1Q9GZX9 223 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 AIG1Q9NVV5 245 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 TRAV6A0A075B6T7 132 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ZCWPW2A0A1B0GU75 182 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 K7EQM0 130 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ENSAO43768 121 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 TIMM8AO60220 97 aaPredicted RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ATXN1LP0C7T5 689 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CPMP14384 443 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 GABRR1P24046 479 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC5A2P31639 672 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 UFM1P61960 85 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF404Q494X3 552 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 PIAS4Q8N2W9 510 aaPredicted RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 OR5AK2Q8NH90 309 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF480Q8WV37 535 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 GINS3Q9BRX5 216 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 C1QTNF2Q9BXJ5 285 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 DSCR3O14972 297 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC2A5P22732 501 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CD34P28906 385 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 PRDX3P30048 256 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CAV2P51636 162 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF45Q02386 682 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CATR1Q13166 79 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 EIF2B1Q14232 305 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 PDLIM3Q53GG5 364 aaPredicted RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 PLCXD3Q63HM9 321 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC46A3Q7Z3Q1 461 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 OR52E2Q8NGJ4 325 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 RLN3Q8WXF3 142 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 TSSK2Q96PF2 358 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 PCDHA9Q9Y5H5 950 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ABCA4P78363 2273 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 F5H5K5 113 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 IFNA17P01571 189 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 RPS17P08708 135 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CCR7P32248 378 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 GMPRP36959 345 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 PBX2P40425 430 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 VEGFCP49767 419 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 RPL11P62913 178 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 MEP1AQ16819 746 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ZBED5Q49AG3 693 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 FAM109AQ8N4B1 249 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 ARRDC2Q8TBH0 407 aa7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CMSS1Q9BQ75 279 aaKnown RBP7.78□□□□□ -1.16
PCDHB1-201ENST00000306549 CEBPZOSA8MTT3 80 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 DCNP07585 359 aaKnown RBP7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF44P15621 663 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 F2RP25116 425 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 PKLRP30613 574 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 SNCAP37840 140 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 ATP1B3P54709 279 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 ACSM3Q53FZ2 586 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 CLVS2Q5SYC1 327 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 OR5D14Q8NGL3 314 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 WDR20Q8TBZ3 569 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC25A31Q9H0C2 315 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 ERVK13-1Q9NX77 482 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 CORINQ9Y5Q5 1042 aa7.77□□□□□ -1.16
PCDHB1-201ENST00000306549 FEZF1A0PJY2 475 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 H0YGG7 62 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 CYC1P08574 325 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 H2AFB2P0C5Z0 115 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SMAD2Q15796 467 aaKnown RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 WDR53Q7Z5U6 358 aaPredicted RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 FAM156AQ8NDB6 213 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 PSMF1Q92530 271 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 NEIL2Q969S2 332 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 TESQ9UGI8 421 aaKnown RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 B3GNT3Q9Y2A9 372 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 KLF13Q9Y2Y9 288 aaPredicted RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 PSAT1Q9Y617 370 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SIGLEC6O43699 453 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 MRPL33O75394 65 aaKnown RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 PYCR1P32322 319 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 FXYD4P59646 89 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 GPR18Q14330 331 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 CDONQ4KMG0 1287 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 CCDC58Q4VC31 144 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 C6orf132Q5T0Z8 1188 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 MMP21Q8N119 569 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 OR7G2Q8NG99 324 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 OR8J2Q8NGG1 315 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 FRZBQ92765 325 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SDSLQ96GA7 329 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 ERVMER34-1Q9H9K5 563 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 VWA8A3KMH1 1905 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms