RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 KIR2DS3Q14952 304 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 ARHGAP40Q5TG30 622 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 C12orf73Q69YU5 71 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 PLPP6Q8IY26 295 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 KLHL15Q96M94 604 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 SAV1Q9H4B6 383 aaPredicted RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 NRIP3Q9NQ35 241 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 PRSS16Q9NQE7 514 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 A4GNTQ9UNA3 340 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 COPS3Q9UNS2 423 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 ZNF281Q9Y2X9 895 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 A0A0A6YYJ9 748 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 SBK2P0C263 348 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 OR2T7P0C7T2 308 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 MAKP20794 623 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 MRPS10P82664 201 aaKnown RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 DGCR2P98153 550 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 RASGEF1BQ0VAM2 473 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 FAM76BQ5HYJ3 339 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 UBE2NLQ5JXB2 153 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 TMEM64Q6YI46 380 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 OR2T27Q8NH04 317 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 FCRL1Q96LA6 429 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 JSRP1Q96MG2 331 aaPredicted RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 ISG20L2Q9H9L3 353 aaKnown RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 EMC7Q9NPA0 242 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 RBM7Q9Y580 266 aaKnown RBP12.33□□□□□ -0.44
DDX54-201ENST00000306014 HCFC2Q9Y5Z7 792 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 PCM1Q15154 2024 aa12.33□□□□□ -0.44
DDX54-201ENST00000306014 ZNF726A6NNF4 738 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 VNN2O95498 520 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 RAP2BP61225 183 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 INSL4Q14641 139 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 ADAMTSL4Q6UY14 1074 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 KCTD20Q7Z5Y7 419 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 ANKRD53Q8N9V6 530 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 STOML3Q8TAV4 291 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 LMX1AQ8TE12 382 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 THAP3Q8WTV1 239 aaPredicted RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 SLC35A4Q96G79 324 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 SEC22CQ9BRL7 303 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 CAMK2AQ9UQM7 478 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 A0A1W2PPL8 197 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 ZNF705EA8MWA4 302 aaPredicted RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 GPRIN2O60269 458 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 PROS1P07225 676 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 PTBP1P26599 531 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX54-201ENST00000306014 HMGA2P52926 109 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 HCCSP53701 268 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 HHEXQ03014 270 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 LTBQ06643 244 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 FGL1Q08830 312 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 TRMT12Q53H54 448 aaKnown RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 ZNF440Q8IYI8 595 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 ARL14Q8N4G2 192 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 NAXEQ8NCW5 288 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 OR13C5Q8NGS8 318 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 OR52A5Q9H2C5 316 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 B3GNT2Q9NY97 397 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 A0A0B4J203 849 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 PRRT4C9JH25 899 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 H0YGG7 62 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 H3BQ06 376 aaPredicted RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 PEX12O00623 359 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 F3P13726 295 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 METAP1P53582 386 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 CLDN20P56880 219 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 ARF3P61204 181 aaPredicted RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 PLCXD2Q0VAA5 305 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 ERV3-1Q14264 604 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 SLC18B1Q6NT16 456 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 GPAT4Q86UL3 456 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 PRR22Q8IZ63 422 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 DDOQ99489 341 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 PPA2Q9H2U2 334 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 KLRF1Q9NZS2 232 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 NPFFR2Q9Y5X5 522 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 TEX13DA0A0J9YY54 714 aaPredicted RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 PRSS38A1L453 326 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 TRIM64A6NGJ6 449 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 EIF4EP06730 217 aaKnown RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 CSF1P09603 554 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 CCR2P41597 374 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 SOX9P48436 509 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 SLC35F3Q8IY50 421 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 ZNF511Q8NB15 262 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 OR9A4Q8NGU2 314 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 TGM7Q96PF1 710 aa12.32□□□□□ -0.44
DDX54-201ENST00000306014 CHMP1AQ9HD42 196 aaPredicted RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 FGF20Q9NP95 211 aaPredicted RBP12.32□□□□□ -0.44
DDX54-201ENST00000306014 MBNL1Q9NR56 388 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms