RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 TMEM41AQ96HV5 264 aa9.38□□□□□ -0.91
GABRB3-201ENST00000299267 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
GABRB3-201ENST00000299267 ZNF222Q9UK12 451 aa9.38□□□□□ -0.91
GABRB3-201ENST00000299267 ZNF337Q9Y3M9 751 aa9.38□□□□□ -0.91
GABRB3-201ENST00000299267 A0A1B0GTQ1 180 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 HRO43593 1189 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 AKR7A3O95154 331 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 DDAH2O95865 285 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CD79AP11912 226 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 MAKP20794 623 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PPICP45877 212 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 EMDP50402 254 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 ZNF691Q5VV52 312 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 OR7E24Q6IFN5 339 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PGBD2Q6P3X8 592 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 LACC1Q8IV20 430 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CROCCP3Q8IVE0 287 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 SPRYD4Q8WW59 207 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 DUSP15Q9H1R2 295 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CHMP1AQ9HD42 196 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 SACM1LQ9NTJ5 587 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 TUBA8Q9NY65 449 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CCL27Q9Y4X3 112 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 IGKV1-8A0A0C4DH67 115 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 AGAP5A6NIR3 686 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CD46P15529 392 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 RIDAP52758 137 aaKnown RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 MBOAT2Q6ZWT7 520 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PAPD5Q8NDF8 572 aaKnown RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 OLAHQ9NV23 265 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PLEK2Q9NYT0 353 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 GRIP1Q9Y3R0 1128 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 B3GALT1Q9Y5Z6 326 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 TMEM14AQ9Y6G1 99 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 COL4A6Q14031 1691 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 SLC2A10O95528 541 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CSTBP04080 98 aaKnown RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CAPNS1P04632 268 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PRPH2P23942 346 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 RIN1Q13671 783 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 KEAP1Q14145 624 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 AGERQ15109 404 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 ARHGAP11BQ3KRB8 267 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 HSD17B12Q53GQ0 312 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 NT5CQ8TCD5 201 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 GPR119Q8TDV5 335 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 SGCDQ92629 289 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 MVB12AQ96EY5 273 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 WACQ9BTA9 647 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 UBQLN3Q9H347 655 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 POLE4Q9NR33 117 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 C14orf119Q9NWQ9 140 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PDCD11Q14690 1871 aaKnown RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PRAMEF25A6NGN4 478 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 MT-CO3P00414 261 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 STARD6P59095 220 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 DBPQ10586 325 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 EIF2B1Q14232 305 aaKnown RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 TBC1D25Q3MII6 688 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 ACSM5Q6NUN0 579 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 CCDC80Q76M96 950 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 DPY19L4Q7Z388 723 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 OR7G1Q8NGA0 311 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 TRUB1Q8WWH5 349 aaKnown RBP9.37□□□□□ -0.91
GABRB3-201ENST00000299267 PLA2G3Q9NZ20 509 aa9.37□□□□□ -0.91
GABRB3-201ENST00000299267 TMEM72A0PK05 275 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 DCDC2BA2VCK2 349 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 SYT5O00445 386 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 SNPHO15079 494 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 SLITRK5O94991 958 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 CLDN17P56750 224 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 UBE2IP63279 158 aaKnown RBP9.36□□□□□ -0.91
GABRB3-201ENST00000299267 SIRPAP78324 504 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 GLO1Q04760 184 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 MFSD13AQ14CX5 517 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 TRIP6Q15654 476 aaKnown RBP9.36□□□□□ -0.91
GABRB3-201ENST00000299267 PMS2CLQ68D20 193 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 LRRC69Q6ZNQ3 347 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 ZNF367Q7RTV3 350 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 C4orf36Q96KX1 117 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 TSSK2Q96PF2 358 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 STACQ99469 402 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 SEMA4CQ9C0C4 833 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 VSX1Q9NZR4 365 aaPredicted RBP9.36□□□□□ -0.91
GABRB3-201ENST00000299267 ZFC3H1O60293 1989 aaKnown RBP9.36□□□□□ -0.91
GABRB3-201ENST00000299267 PRKYO43930 277 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 LCATP04180 440 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 OR8G3PP0DMU2 310 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 POU3F4P49335 361 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 RNF4P78317 190 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 ENTHD1Q8IYW4 607 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 TMEM52Q8NDY8 209 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 PMM1Q92871 262 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 FER1L6-AS2Q96M78 137 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 LMF1Q96S06 567 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 DEFB127Q9H1M4 99 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 LRFN1Q9P244 771 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 POU2F3Q9UKI9 436 aa9.36□□□□□ -0.91
GABRB3-201ENST00000299267 BOKQ9UMX3 212 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms