RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PNMTP11086 282 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 FUT1P19526 365 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 ENPP1P22413 925 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 MLLT10P55197 1068 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 EXT1Q16394 746 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 SNAPC1Q16533 368 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 PGGHGQ32M88 737 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 CLEC12AQ5QGZ9 265 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 MEDAGQ5VYS4 303 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 DHRS13Q6UX07 377 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 LYPD8Q6UX82 237 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 TMEM163Q8TC26 289 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 FANK1Q8TC84 345 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 ZNF524Q96C55 264 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 SAMD8Q96LT4 415 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 SLC38A2Q96QD8 506 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 KLHDC3Q9BQ90 382 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 LHPPQ9H008 270 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 C12orf10Q9HB07 376 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 GPR83Q9NYM4 423 aa14.19□□□□□ -0.14
LSM6-201ENST00000296581 EFCAB10A6NFE3 127 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 TLX2O43763 284 aaPredicted RBP14.18□□□□□ -0.14
LSM6-201ENST00000296581 RCBTB2O95199 551 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 IGF2P01344 180 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 PIPP12273 146 aaPredicted RBP14.18□□□□□ -0.14
LSM6-201ENST00000296581 FBXW4P57775 412 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 CRYZQ08257 329 aaKnown RBP14.18□□□□□ -0.14
LSM6-201ENST00000296581 TRIP6Q15654 476 aaKnown RBP14.18□□□□□ -0.14
LSM6-201ENST00000296581 BTBD16Q32M84 506 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 CDONQ4KMG0 1287 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 SLC30A6Q6NXT4 461 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 NUP54Q7Z3B4 507 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 ANKRD13BQ86YJ7 626 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 MISPQ8IVT2 679 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 OR2T33Q8NG76 320 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 OR13C2Q8NGS9 318 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 TTC9Q92623 222 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 SH3YL1Q96HL8 342 aaPredicted RBP14.18□□□□□ -0.14
LSM6-201ENST00000296581 DEFB126Q9BYW3 111 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 ADAM19Q9H013 955 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 UBQLN3Q9H347 655 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 HHATLQ9HCP6 504 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 MED17Q9NVC6 651 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 DNAJC27Q9NZQ0 273 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 IGKV1D-42A0A075B6H8 117 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 NOL3O60936 208 aaKnown RBP14.18□□□□□ -0.14
LSM6-201ENST00000296581 SAGP10523 405 aaPredicted RBP14.18□□□□□ -0.14
LSM6-201ENST00000296581 CCNA2P20248 432 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 SLC1A3P43003 542 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 MAP2K4P45985 399 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 SYT14P1Q58G82 188 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 HES3Q5TGS1 186 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 PLAG1Q6DJT9 500 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 OR5W2Q8NH69 310 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 M1APQ8TC57 530 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 CT55Q8WUE5 264 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 TMCO6Q96DC7 493 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 PRRX2Q99811 253 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 TMEM43Q9BTV4 400 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 TEX12Q9BXU0 123 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 ACOT13Q9NPJ3 140 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 SDK2Q58EX2 2172 aa14.18□□□□□ -0.14
LSM6-201ENST00000296581 ZNF99A8MXY4 864 aaPredicted RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 SOCS6O14544 535 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 SURF4O15260 269 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 HCN1O60741 890 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 DKK1O94907 266 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 ALX3O95076 343 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 BCL10O95999 233 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 HMGN1P05114 100 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 P2RX1P51575 399 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 FHL1Q13642 323 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 ZNF846Q147U1 533 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 SMARCD3Q6STE5 483 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 SLC43A2Q8N370 569 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 OR11G2Q8NGC1 345 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 OR52L1Q8NGH7 329 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 ZNF563Q8TA94 476 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 SLC22A8Q8TCC7 542 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 SGTBQ96EQ0 304 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 MMP25Q9NPA2 562 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 RPL36Q9Y3U8 105 aaKnown RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 ELOA3DA6NLF2 546 aaPredicted RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 C17orf51A8MQB3 221 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 BHLHE40O14503 412 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 GNB5O14775 395 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 SLC22A1O15245 554 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 TMCC2O75069 709 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 INMTO95050 263 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 FADS2O95864 444 aaKnown RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 STSP08842 583 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 FBXO45P0C2W1 286 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 BMP7P18075 431 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 PGCP20142 388 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 ACVR2AP27037 513 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 C21orf33P30042 268 aaPredicted RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 GRK5P34947 590 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 OPRL1P41146 370 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 GP2P55259 537 aaKnown RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 P2RX3P56373 397 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms