RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 DNAJA4Q8WW22 397 aaPredicted RBP16.12■□□□□ 0.17
CCDC78-201ENST00000293889 ST8SIA1Q92185 356 aa16.12■□□□□ 0.17
CCDC78-201ENST00000293889 PPP1R14BQ96C90 147 aa16.12■□□□□ 0.17
CCDC78-201ENST00000293889 PRSS27Q9BQR3 290 aa16.12■□□□□ 0.17
CCDC78-201ENST00000293889 MFRPQ9BY79 579 aa16.12■□□□□ 0.17
CCDC78-201ENST00000293889 ADAM19Q9H013 955 aa16.12■□□□□ 0.17
CCDC78-201ENST00000293889 UBQLN3Q9H347 655 aa16.12■□□□□ 0.17
CCDC78-201ENST00000293889 SMG1Q96Q15 3661 aaKnown RBP16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 CHP2O43745 196 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 E2F6O75461 281 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 SEC14L2O76054 403 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 GLSO94925 669 aaPredicted RBP16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TCEA1P23193 301 aaKnown RBP16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TACR3P29371 465 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TMBIM6P55061 237 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 FOXK1P85037 733 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TOP3AQ13472 1001 aaPredicted RBP16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TRAM2Q15035 370 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 EXOC3L2Q2M3D2 409 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 ALG10BQ5I7T1 473 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 FGD3Q5JSP0 725 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 WDR88Q6ZMY6 472 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 Q6ZS92 163 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 ASB18Q6ZVZ8 466 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 KCTD8Q6ZWB6 473 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 ZDHHC13Q8IUH4 622 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 RNF217Q8TC41 542 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 SLC7A13Q8TCU3 470 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TMEM234Q8WY98 164 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 SLC38A4Q969I6 547 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 EPYCQ99645 322 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 RBM4BQ9BQ04 359 aaKnown RBP16.11■□□□□ 0.17
CCDC78-201ENST00000293889 FUZQ9BT04 418 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 RBM4Q9BWF3 364 aaKnown RBP16.11■□□□□ 0.17
CCDC78-201ENST00000293889 TTTY12Q9BZ98 90 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 SLC25A18Q9H1K4 315 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 SELENONQ9NZV5 590 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 DKKL1Q9UK85 242 aa16.11■□□□□ 0.17
CCDC78-201ENST00000293889 A0A087WZY1 265 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 SHISA8B8ZZ34 492 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 FAM47E-STBD1D6RA91 191 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 H3BMQ9 156 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 ETV2O00321 342 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-201ENST00000293889 KALRNO60229 2985 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 ZIC3O60481 467 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 CLIC3O95833 236 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 SRD5A2P31213 254 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 DNAJA1P31689 397 aaKnown RBP16.1■□□□□ 0.17
CCDC78-201ENST00000293889 DLX5P56178 289 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 PLGLB1Q02325 96 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 IL18R1Q13478 541 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 LAPTM4AQ15012 233 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 SLC25A53Q5H9E4 307 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 PODNL1Q6PEZ8 512 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 GRINAQ7Z429 371 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 ATG4DQ86TL0 474 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-201ENST00000293889 OR5K1Q8NHB7 308 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 POC1BQ8TC44 478 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 FBLIM1Q8WUP2 373 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 COG8Q96MW5 612 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 MUS81Q96NY9 551 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 ALPK1Q96QP1 1244 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 BARD1Q99728 777 aaKnown RBP16.1■□□□□ 0.17
CCDC78-201ENST00000293889 ANKRD19PQ9H560 264 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 FAM118AQ9NWS6 357 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 OSGIN1Q9UJX0 560 aa16.1■□□□□ 0.17
CCDC78-201ENST00000293889 FAM166BA8MTA8 275 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 G3V2T6 193 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 SFTPCP11686 197 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 HK1P19367 917 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 POLR2HP52434 150 aaKnown RBP16.09■□□□□ 0.17
CCDC78-201ENST00000293889 FOXF1Q12946 379 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 TOMM20Q15388 145 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 SEC23BQ15437 767 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 HYAL4Q2M3T9 481 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 RFX4Q33E94 735 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 SHQ1Q6PI26 577 aaKnown RBP16.09■□□□□ 0.17
CCDC78-201ENST00000293889 LINC00114Q6XXX2 140 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 HS3ST5Q8IZT8 346 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 LSM14AQ8ND56 463 aaKnown RBP16.09■□□□□ 0.17
CCDC78-201ENST00000293889 OR5M1Q8NGP8 315 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 TMEM255BQ8WV15 326 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 ZBTB8AQ96BR9 441 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 SDCCAG3Q96C92 435 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 MRGPRX4Q96LA9 322 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 GABARAPL1Q9H0R8 117 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 ZNF703Q9H7S9 590 aaPredicted RBP16.09■□□□□ 0.17
CCDC78-201ENST00000293889 B4GALT7Q9UBV7 327 aa16.09■□□□□ 0.17
CCDC78-201ENST00000293889 MAGED1Q9Y5V3 778 aaPredicted RBP16.09■□□□□ 0.17
CCDC78-201ENST00000293889 SLC16A6O15403 523 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 ATE1O95260 518 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 PNMTP11086 282 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 PTNP21246 168 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 FPR1P21462 350 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 CRHBPP24387 322 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 GDF1P27539 372 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 HTR3AP46098 478 aa16.08■□□□□ 0.17
CCDC78-201ENST00000293889 PPIAP62937 165 aaKnown RBP16.08■□□□□ 0.17
CCDC78-201ENST00000293889 LSM11P83369 360 aaKnown RBP eCLIP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms