RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 GPA33Q99795 319 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 TMEM43Q9BTV4 400 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 PDP1Q9P0J1 537 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 TNFRSF10DQ9UBN6 386 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 NPIPA5E9PKD4 350 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 G3V2T6 193 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 H0YC42 278 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 ZNF208O43345 1280 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 SFTPCP11686 197 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 ELK4P28324 431 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 TPD52P55327 224 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 KLRB1Q12918 225 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 SELENBP1Q13228 472 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 LPCAT4Q643R3 524 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 C3orf33Q6P1S2 294 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 NEIL3Q8TAT5 605 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 NRBF2Q96F24 287 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 PLSCR2Q9NRY7 297 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 STOML1Q9UBI4 398 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 TMCC3Q9ULS5 477 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 NPIPA1Q9UND3 350 aa19.65■□□□□ 0.74
PDLIM3-203ENST00000284771 IGSF10Q6WRI0 2623 aa19.64■□□□□ 0.74
PDLIM3-203ENST00000284771 A8MVM7 634 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 LRRN3E7EW58 273 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 GASTP01350 101 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 BMP7P18075 431 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 CHMP24386 653 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 OMPP47874 163 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 CLDN15P56746 228 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 CLDN20P56880 219 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 RAC1P63000 192 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 LTBQ06643 244 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 PRR30Q53SZ7 412 aaPredicted RBP19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 SYT14P1Q58G82 188 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 ZDHHC13Q8IUH4 622 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 RNF113BQ8IZP6 322 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 GIPC3Q8TF64 312 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 SNRNP40Q96DI7 357 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 WBP1Q96G27 269 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 SLC29A1Q99808 456 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 PTDSS2Q9BVG9 487 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 SERINC1Q9NRX5 453 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 SPRR3Q9UBC9 169 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 MED31Q9Y3C7 131 aa19.64■□□□□ 0.73
PDLIM3-203ENST00000284771 TRGV5A0A0B4J1U4 118 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 CASQ2O14958 399 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 ZNHIT1O43257 154 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 OR10H3O60404 316 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 CCNB2O95067 398 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 PEX2P28328 305 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 SFTPDP35247 375 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 MAP2K6P52564 334 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 SUCLG1P53597 346 aaKnown RBP19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 CRYZQ08257 329 aaKnown RBP19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 GK3PQ14409 553 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 TRIP10Q15642 601 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 LRRC36Q1X8D7 754 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 TMEM176BQ3YBM2 270 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 OTUD3Q5T2D3 398 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 PGBD2Q6P3X8 592 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 STK32CQ86UX6 486 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 OR10G2Q8NGC3 310 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 TAAR8Q969N4 342 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 DTNBP1Q96EV8 351 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 FEVQ99581 238 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 SLC19A3Q9BZV2 496 aa19.63■□□□□ 0.73
PDLIM3-203ENST00000284771 CRYABP02511 175 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 MAKP20794 623 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 RPS5P46782 204 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 LHX2P50458 406 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 HSF1Q00613 529 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 PRKCDQ05655 676 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 NHSL2Q5HYW2 709 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 VASNQ6EMK4 673 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 C1orf94Q6P1W5 598 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 GGNQ86UU5 652 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 SVOPLQ8N434 492 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 STK35Q8TDR2 534 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 NIPSNAP1Q9BPW8 284 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 LDAHQ9H6V9 325 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 A0A1B0GVC2 190 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 A0A1W2PNR3 127 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 SOCS2O14508 198 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 CDC42EP2O14613 210 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 IFI30P13284 250 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 POU2F1P14859 743 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 FUT1P19526 365 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 DAPP51397 102 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 ARHGDIAP52565 204 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 CTBP2P56545 445 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 CTU2Q2VPK5 515 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 C1orf140Q5VVS0 124 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 FAM180AQ6UWF9 173 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 RRM2BQ7LG56 351 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 HIPK1Q86Z02 1210 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 FAR1Q8WVX9 515 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 SMPDL3BQ92485 455 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 BPIFA2Q96DR5 249 aa19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 FAM46AQ96IP4 442 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-203ENST00000284771 MOGAT1Q96PD6 335 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms