RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 DAPP51397 102 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 RAB5BP61020 215 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 TGFBR3Q03167 851 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 DYRK1AQ13627 763 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 POU4F3Q15319 338 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 CYP4V2Q6ZWL3 525 aaPredicted RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 ZNF679Q8IYX0 411 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 SLC7A5P1Q8MH63 180 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ZNF610Q8N9Z0 462 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 PHOSPHO2Q8TCD6 241 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 CXorf36Q9H7Y0 433 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 ACSS1Q9NUB1 689 aaPredicted RBP10.68□□□□□ -0.7
USP53-201ENST00000274030 IL37Q9NZH6 218 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 SLC6A14Q9UN76 642 aa10.68□□□□□ -0.7
USP53-201ENST00000274030 VIRMAQ69YN4 1812 aaKnown RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 MYO7AQ13402 2215 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 ZNF593O00488 134 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 SUSD5O60279 629 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 MRPL33O75394 65 aaKnown RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 RAB6AP20340 208 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 CD79BP40259 229 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 CLDN17P56750 224 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 CYCSP99999 105 aaKnown RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 TNFRSF17Q02223 184 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 BCL7AQ4VC05 210 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 ZNF585AQ6P3V2 769 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 SLCO4C1Q6ZQN7 724 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 SULF2Q8IWU5 870 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 MKXQ8IYA7 352 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 PARP16Q8N5Y8 322 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 FRZBQ92765 325 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 ZNF583Q96ND8 569 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 AP1M2Q9Y6Q5 423 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 PTPRZ1P23471 2315 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 AP1G1O43747 822 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 ALPLP05186 524 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 HNF4GQ14541 408 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 SLC9A3R2Q15599 337 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 FAM83HQ6ZRV2 1179 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 LINC00696Q6ZRV3 163 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 ESX1Q8N693 406 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 TCTN2Q96GX1 697 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 TMEM100Q9NV29 134 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 PCDHB10Q9UN67 800 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 MEIOCA2RUB1 952 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 SRPX2O60687 465 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 ZNF780AO75290 641 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 HTR3AP46098 478 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 HTR5AP47898 357 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 LRRC26Q2I0M4 334 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 APOOLQ6UXV4 268 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 KANSL1Q7Z3B3 1105 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 OR7G2Q8NG99 324 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 PPP1R35Q8TAP8 253 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 ZBTB8AQ96BR9 441 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 RSPRY1Q96DX4 576 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 EHFQ9NZC4 300 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 CCDC88AQ3V6T2 1871 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 OR7C1O76099 320 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 IDH3GP51553 393 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 SLC14A1Q13336 389 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 GK2Q14410 553 aaPredicted RBP10.67□□□□□ -0.7
USP53-201ENST00000274030 ESPNLQ6ZVH7 1005 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 SLC16A14Q7RTX9 510 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 NOXA1Q86UR1 476 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 TMEM185AQ8NFB2 350 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 BBS1Q8NFJ9 593 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 OR13C9Q8NGT0 318 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 OR6F1Q8NGZ6 308 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 NMNAT3Q96T66 252 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 PFDN5Q99471 154 aa10.67□□□□□ -0.7
USP53-201ENST00000274030 OR6C6A6NF89 314 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TTLL8A6PVC2 850 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 HHLA1C9JL84 531 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 ALDH3B2P48448 385 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 CNN3Q15417 329 aaKnown RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 SLC6A19Q695T7 634 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 OPN5Q6U736 354 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 DRAXINQ8NBI3 349 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 NAT6Q93015 286 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 DCBLD2Q96PD2 775 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TUBB1Q9H4B7 451 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 CNOT2Q9NZN8 540 aaKnown RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 LOC102725191A0A1B0GVB3 256 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 B4DXG7 233 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 H0YIV9 168 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 FOXE1O00358 373 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 IFNA4P05014 189 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 EFNA3P52797 238 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 CLDN6P56747 220 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TSPAN31Q12999 210 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 NHSL2Q5HYW2 709 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 GPR139Q6DWJ6 353 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 TLDC1Q6P9B6 456 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 ADIPOR2Q86V24 386 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
USP53-201ENST00000274030 GRAMD2AQ8IUY3 354 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 NRSN2Q9GZP1 204 aa10.66□□□□□ -0.7
USP53-201ENST00000274030 NAV1Q8NEY1 1877 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms