RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TSPAN4O14817 238 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 KHNYNO15037 678 aaKnown RBP25.33■■□□□ 1.65
CBX4-201ENST00000269397 DBIP07108 87 aaKnown RBP25.33■■□□□ 1.65
CBX4-201ENST00000269397 NGFRP08138 427 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 ATF4P18848 351 aaPredicted RBP25.33■■□□□ 1.65
CBX4-201ENST00000269397 PSMB1P20618 241 aaKnown RBP25.33■■□□□ 1.65
CBX4-201ENST00000269397 RUNX2Q13950 521 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 OPCMLQ14982 345 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 HSD17B12Q53GQ0 312 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 APOOLQ6UXV4 268 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 C7orf50Q9BRJ6 194 aaKnown RBP25.33■■□□□ 1.65
CBX4-201ENST00000269397 GSTZ1O43708 216 aaPredicted RBP25.32■■□□□ 1.64
CBX4-201ENST00000269397 SERPINA3P01011 423 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 AGBL4Q5VU57 503 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 ZNF425Q6IV72 752 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 SLITRK4Q8IW52 837 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 RAB11FIP5Q9BXF6 653 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 GXYLT2A0PJZ3 443 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 ADAM11O75078 769 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 UCHL1P09936 223 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 HIST1H1CP16403 213 aaKnown RBP25.32■■□□□ 1.64
CBX4-201ENST00000269397 GBX2P52951 348 aaPredicted RBP25.32■■□□□ 1.64
CBX4-201ENST00000269397 ACTC1P68032 377 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 ACTA1P68133 377 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 UBE2NLQ5JXB2 153 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 FCRLAQ7L513 359 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 CNOT9Q92600 299 aaKnown RBP25.32■■□□□ 1.64
CBX4-201ENST00000269397 ELMOD3Q96FG2 381 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 SFXN2Q96NB2 322 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 GFI1Q99684 422 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 ANKRD10Q9NXR5 420 aa25.32■■□□□ 1.64
CBX4-201ENST00000269397 ATP1B1P05026 303 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 CXCL2P19875 107 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 GRPRP30550 384 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 TAGLNQ01995 201 aaKnown RBP25.31■■□□□ 1.64
CBX4-201ENST00000269397 RPL13AP3Q6NVV1 102 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 SPRED2Q7Z698 418 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 MCCC2Q9HCC0 563 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 NTMQ9P121 344 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 ZNF69Q9UC07 566 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 OGG1O15527 345 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 CEACAM5P06731 702 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 ANXA7P20073 488 aaKnown RBP25.31■■□□□ 1.64
CBX4-201ENST00000269397 POU3F2P20265 443 aaPredicted RBP25.31■■□□□ 1.64
CBX4-201ENST00000269397 FAM199XQ6PEV8 388 aaPredicted RBP25.31■■□□□ 1.64
CBX4-201ENST00000269397 SLC51BQ86UW2 128 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 GAL3ST3Q96A11 431 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 RAB7BQ96AH8 199 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 NRIP3Q9NQ35 241 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 FLRT3Q9NZU0 649 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 POMT2Q9UKY4 750 aa25.31■■□□□ 1.64
CBX4-201ENST00000269397 A0A1W2PP55 124 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 TEX46H3BTG2 121 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 P2RX6O15547 441 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 KHDRBS3O75525 346 aaKnown RBP25.3■■□□□ 1.64
CBX4-201ENST00000269397 MAP2K6P52564 334 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 GXYLT1Q4G148 440 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 SLC25A38Q96DW6 304 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 GPR174Q9BXC1 333 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 ZCCHC4Q9H5U6 513 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 PHPT1Q9NRX4 125 aaPredicted RBP25.3■■□□□ 1.64
CBX4-201ENST00000269397 ADAM18Q9Y3Q7 739 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 POM121CA8CG34 1229 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 PIN1P1O15428 100 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 ACSM4P0C7M7 580 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 CPMP14384 443 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 SRMP19623 302 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 MAT2AP31153 395 aaKnown RBP25.3■■□□□ 1.64
CBX4-201ENST00000269397 TSFMP43897 325 aaKnown RBP25.3■■□□□ 1.64
CBX4-201ENST00000269397 FKRPQ9H9S5 495 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 COPS3Q9UNS2 423 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 EML2O95834 649 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 RPS15P62841 145 aaKnown RBP25.3■■□□□ 1.64
CBX4-201ENST00000269397 SEZ6L2Q6UXD5 910 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 C12orf76Q8N812 135 aaPredicted RBP25.3■■□□□ 1.64
CBX4-201ENST00000269397 HAO2Q9NYQ3 351 aa25.3■■□□□ 1.64
CBX4-201ENST00000269397 ANKRD61A6NGH8 418 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 SELENOFO60613 162 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 RPS4Y1P22090 263 aaKnown RBP25.29■■□□□ 1.64
CBX4-201ENST00000269397 SFRP5Q5T4F7 317 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 RIT1Q92963 219 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 LINC00052Q96N35 136 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 SERPINI2O75830 405 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 GABRA3P34903 492 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 FHL1Q13642 323 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 SLC35F2Q8IXU6 374 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 MOSPD2Q8NHP6 518 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 LCN9Q8WX39 176 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 RADILQ96JH8 1075 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 CNN2Q99439 309 aaKnown RBP25.29■■□□□ 1.64
CBX4-201ENST00000269397 TMEM27Q9HBJ8 222 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 NOX3Q9HBY0 568 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 PIPOXQ9P0Z9 390 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 FKBP7Q9Y680 259 aa25.29■■□□□ 1.64
CBX4-201ENST00000269397 A0A1B0GWA3 101 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 TGM6O95932 706 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 NHLRC1Q6VVB1 395 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 PRSS41Q7RTY9 318 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 PRSS42Q7Z5A4 293 aa25.28■■□□□ 1.64
CBX4-201ENST00000269397 GPAT4Q86UL3 456 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms