RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ZSWIM7Q19AV6 140 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 LIN52Q52LA3 116 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 ZNF100Q8IYN0 542 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 CLIP4Q8N3C7 705 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 DDIT4LQ96D03 193 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 TMEM19Q96HH6 336 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 RAD21L1Q9H4I0 556 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 TMEM45AQ9NWC5 275 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 CCDC167Q9P0B6 97 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 EMC3Q9P0I2 261 aa14.24□□□□□ -0.13
USE1-201ENST00000263897 GPR171O14626 319 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 PLAUP00749 431 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 THBS1P07996 1170 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 NUDT7P0C024 238 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 IMPDH2P12268 514 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 H2AFXP16104 143 aaPredicted RBP14.23□□□□□ -0.13
USE1-201ENST00000263897 SLC16A1P53985 500 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 SLC35A1P78382 337 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 FADDQ13158 208 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 TAB1Q15750 504 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 RPS26P11Q5JNZ5 115 aaPredicted RBP14.23□□□□□ -0.13
USE1-201ENST00000263897 LRIF1Q5T3J3 769 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 RNF220Q5VTB9 566 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 PRAMEF8Q5VWM4 474 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 PRAMEF7Q5VXH5 474 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 ALKBH2Q6NS38 261 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 ZNF704Q6ZNC4 412 aaPredicted RBP14.23□□□□□ -0.13
USE1-201ENST00000263897 C20orf204Q6ZNR8 217 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 BHLHA15Q7RTS1 189 aaPredicted RBP14.23□□□□□ -0.13
USE1-201ENST00000263897 CCDC103Q8IW40 242 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 WFDC11Q8NEX6 87 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 PIGXQ8TBF5 258 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 CKAP2Q8WWK9 683 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 SPDL1Q96EA4 605 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 TMEM204Q9BSN7 226 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 SPATA9Q9BWV2 254 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 POTEKPQ9BYX7 375 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 BCL2L10Q9HD36 194 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 A4GALTQ9NPC4 353 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 NGBQ9NPG2 151 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 ARGLU1Q9NWB6 273 aaPredicted RBP14.23□□□□□ -0.13
USE1-201ENST00000263897 SLC25A37Q9NYZ2 338 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 SLAMF8Q9P0V8 285 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 ZNF443Q9Y2A4 671 aaPredicted RBP14.23□□□□□ -0.13
USE1-201ENST00000263897 IFT52Q9Y366 437 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 CHST2Q9Y4C5 530 aa14.23□□□□□ -0.13
USE1-201ENST00000263897 ZC3H12DA2A288 527 aaKnown RBP14.22□□□□□ -0.13
USE1-201ENST00000263897 ARHGEF9O43307 516 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 EIF1BO60739 113 aaKnown RBP14.22□□□□□ -0.13
USE1-201ENST00000263897 RAMP1O60894 148 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 SMPD2O60906 423 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 FOSL1P15407 271 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 CXCR1P25024 350 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 NTF4P34130 210 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 ATP4BP51164 291 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 COPZ1P61923 177 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 IRX1P78414 480 aaPredicted RBP14.22□□□□□ -0.13
USE1-201ENST00000263897 AGKQ53H12 422 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 PAGE3Q5JUK9 113 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 SHEQ5VZ18 495 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 WBP2NLQ6ICG8 309 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.22□□□□□ -0.13
USE1-201ENST00000263897 KRTAP1-3Q8IUG1 177 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 MSRB3Q8IXL7 192 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 LRRC75A-AS1Q8N1F1 130 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 MAL2Q969L2 176 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 MAGEB18Q96M61 343 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 CCL19Q99731 98 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 NAA11Q9BSU3 229 aaPredicted RBP14.22□□□□□ -0.13
USE1-201ENST00000263897 ARMC7Q9H6L4 198 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 DLL4Q9NR61 685 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 NOSIPQ9Y314 301 aaKnown RBP14.22□□□□□ -0.13
USE1-201ENST00000263897 GMEB1Q9Y692 573 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 USF3Q68DE3 2245 aa14.22□□□□□ -0.13
USE1-201ENST00000263897 LYZL6O75951 148 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 PGM3O95394 542 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 PRG2P13727 222 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 IGHV1-2P23083 117 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 ZNF311Q5JNZ3 666 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 NCMAPQ5T1S8 102 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 FBXW9Q5XUX1 488 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 LSRQ86X29 649 aaPredicted RBP14.21□□□□□ -0.13
USE1-201ENST00000263897 CADM2Q8N3J6 435 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 ZNF433Q8N7K0 673 aaPredicted RBP14.21□□□□□ -0.13
USE1-201ENST00000263897 IGFBPL1Q8WX77 278 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 APH1AQ96BI3 265 aa14.21□□□□□ -0.13
USE1-201ENST00000263897 CACYBPQ9HB71 228 aaKnown RBP14.21□□□□□ -0.13
USE1-201ENST00000263897 TRBV5-3A0A0A0MS03 114 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 A0A1W2PP18 115 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 NR5A2O00482 541 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 HS3ST1O14792 307 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 MRPL33O75394 65 aaKnown RBP14.2□□□□□ -0.14
USE1-201ENST00000263897 ETS2P15036 469 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 COX5AP20674 150 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 PPIBP23284 216 aaKnown RBP14.2□□□□□ -0.14
USE1-201ENST00000263897 CAPRIN1Q14444 709 aaKnown RBP14.2□□□□□ -0.14
USE1-201ENST00000263897 SQLEQ14534 574 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 ADAM5Q6NVV9 412 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 PAQR6Q6TCH4 344 aa14.2□□□□□ -0.14
USE1-201ENST00000263897 SEZ6L2Q6UXD5 910 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms