RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 MAGEL2Q9UJ55 1249 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 BAG5Q9UL15 447 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 TMED7Q9Y3B3 224 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 AP4B1Q9Y6B7 739 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 A0A0J9YW62 118 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 TMEM72A0PK05 275 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 ZC3H12DA2A288 527 aaKnown RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 CPN1P15169 458 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 EIF1AXP47813 144 aaKnown RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 POLR2HP52434 150 aaKnown RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 RAC1P63000 192 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 SELENOWP63302 87 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 SRSF1Q07955 248 aaKnown RBP eCLIP16.49■□□□□ 0.23
SDF4-201ENST00000263741 FOXD4Q12950 439 aaPredicted RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 TMEM176BQ3YBM2 270 aaPredicted RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 C1orf185Q5T7R7 199 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 C3orf33Q6P1S2 294 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 CBLL1Q75N03 491 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 RANBP3LQ86VV4 465 aaPredicted RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 PM20D2Q8IYS1 436 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 RNF217Q8TC41 542 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 KLHL15Q96M94 604 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 MRPS26Q9BYN8 205 aaKnown RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 CHRNA9Q9UGM1 479 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 CLCA1A8K7I4 914 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 C8BP07358 591 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 RNF224P0DH78 156 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 DLX5P56178 289 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 MS4A2Q01362 244 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 OR1Q1Q15612 314 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 MEIOBQ8N635 442 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 SLC35B4Q969S0 331 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 COQ10BQ9H8M1 238 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 SLC9A8Q9Y2E8 581 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 MEMO1Q9Y316 297 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 CACNA1CQ13936 2221 aa16.48■□□□□ 0.23
SDF4-201ENST00000263741 WDR1O75083 606 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 GMNNO75496 209 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 TFPIP10646 304 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.47■□□□□ 0.232e-7■□□□□ 11.1
SDF4-201ENST00000263741 ENTPD8Q5MY95 495 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 SEM1Q6ZVN7 128 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 P3H2Q8IVL5 708 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 OR10D3Q8NH80 312 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 ADGRG7Q96K78 797 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 ARL5BQ96KC2 179 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 NSMCE2Q96MF7 247 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 OR5B2Q96R09 309 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 ZNF559Q9BR84 538 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 ADAM19Q9H013 955 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 RPS6KB2Q9UBS0 482 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 LINC01387J3KSC0 135 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 ACOT8O14734 319 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 CXCL13O43927 109 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 KLK2P20151 261 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 APOBEC1P41238 236 aaKnown RBP16.47■□□□□ 0.23
SDF4-201ENST00000263741 RPL5P46777 297 aaKnown RBP16.47■□□□□ 0.23
SDF4-201ENST00000263741 YAP1P46937 504 aaKnown RBP16.47■□□□□ 0.23
SDF4-201ENST00000263741 TRAP1Q12931 704 aaKnown RBP16.47■□□□□ 0.23
SDF4-201ENST00000263741 C4orf17Q53FE4 359 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 SYT14P1Q58G82 188 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 FKBP9P1Q75LS8 142 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 ATG4DQ86TL0 474 aaPredicted RBP16.47■□□□□ 0.23
SDF4-201ENST00000263741 LZICQ8WZA0 190 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 CCDC120Q96HB5 630 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 SRXN1Q9BYN0 137 aa16.47■□□□□ 0.23
SDF4-201ENST00000263741 DCAF13Q9NV06 445 aaKnown RBP16.47■□□□□ 0.23
SDF4-201ENST00000263741 UTP20O75691 2785 aaKnown RBP16.46■□□□□ 0.23
SDF4-201ENST00000263741 H0YJX3 145 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 PRKD3O94806 890 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 THY1P04216 161 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 FUT4P22083 530 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 SLC7A1P30825 629 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 NUP107P57740 925 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 BCL2A1Q16548 175 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 ALG10BQ5I7T1 473 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 HBMQ6B0K9 141 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 B3GNT6Q6ZMB0 384 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 ADAMTS16Q8TE57 1224 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 DMRTA2Q96SC8 542 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 TRIM2Q9C040 744 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 GORASP2Q9H8Y8 452 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 SERINC1Q9NRX5 453 aa16.46■□□□□ 0.23
SDF4-201ENST00000263741 A0A0B4J2E0 115 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 A0A1B0GX12 115 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 CLPTM1O96005 669 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 CXCR1P25024 350 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 CDH12P55289 794 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 PMPCAQ10713 525 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 TRIM25Q14258 630 aaKnown RBP16.46■□□□□ 0.22
SDF4-201ENST00000263741 IFI44LQ53G44 452 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 ESPNLQ6ZVH7 1005 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 LSMEM1Q8N8F7 131 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 OR2V1Q8NHB1 315 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 FNDC9Q8TBE3 224 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 PKP2Q99959 881 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 TTYH2Q9BSA4 534 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 AMBRA1Q9C0C7 1298 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 ZNF696Q9H7X3 374 aa16.46■□□□□ 0.22
SDF4-201ENST00000263741 TMEM27Q9HBJ8 222 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms