RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SLC29A1Q99808 456 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CDK4P11802 303 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 C1orf61Q13536 156 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CDS1Q92903 461 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 MKRN2Q9H000 416 aaKnown RBP16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 DDX31Q9H8H2 851 aaKnown RBP16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CPNE7Q9UBL6 633 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 KCNK5O95279 499 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 C6orf132Q5T0Z8 1188 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 SERPINA12Q8IW75 414 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CLEC1AQ8NC01 280 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 GTF2H4Q92759 462 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CA5BQ9Y2D0 317 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 SGK494L7N484 410 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 AGPAT2O15120 278 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 TECPR1Q7Z6L1 1165 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 SIMC1Q8NDZ2 872 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 DUSP23Q9BVJ7 150 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 OR52A5Q9H2C5 316 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 PRSS56P0CW18 603 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CSF2RAP15509 400 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CXADRP78310 365 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 CHST14Q8NCH0 376 aa16.35■□□□□ 0.21
NOTCH3-201ENST00000263388 K7EPK0 472 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 MFGE8Q08431 387 aaPredicted RBP16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM122CQ6P4D5 195 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM71E2Q8N5Q1 922 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 UBQLN4Q9NRR5 601 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 EHFQ9NZC4 300 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 CA14Q9ULX7 337 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 KRBOX1C9JBD0 128 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 TPPPO94811 219 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 SRPK3Q9UPE1 567 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 GABRPO00591 440 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 AHRP35869 848 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 NPBWR1P48145 328 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 FABP6P51161 128 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 FN3KRPQ9HA64 309 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 SEMA4GQ9NTN9 838 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 KCMF1Q9P0J7 381 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 C17orf112F2Z3M2 114 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 LCMT2O60294 686 aaKnown RBP16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 ALPLP05186 524 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 BRICD5Q6PL45 260 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 WASH4PA8MWX3 477 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 HLA-HP01893 362 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 HBA1P69905 142 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 OR1Q1Q15612 314 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 PDLIM3Q53GG5 364 aaPredicted RBP16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 PODNL1Q6PEZ8 512 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 MEIS3P1A6NDR6 274 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 IL32P24001 234 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 GMPRP36959 345 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 HBG1P69891 147 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 HBG2P69892 147 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 TLE4Q04727 773 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF542PQ5EBM4 170 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 Q6ZSR6 202 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 TMIGD2Q96BF3 282 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 SLC6A20Q9NP91 592 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
NOTCH3-201ENST00000263388 OPRD1P41143 372 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 SGK3Q96BR1 496 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 BABAM2Q9NXR7 383 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 CEPT1Q9Y6K0 416 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 A0A1W2PQ09 198 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 LDB3O75112 727 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 HIST1H1TP22492 207 aaPredicted RBP16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 NFYAP23511 347 aaPredicted RBP16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 NPRL2Q8WTW4 380 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 CDCA3Q99618 268 aaPredicted RBP16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 MCOLN1Q9GZU1 580 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 HLA-DMAP28067 261 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 VASNQ6EMK4 673 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 CD163Q86VB7 1156 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 UBXN10Q96LJ8 280 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 PRDM9Q9NQV7 894 aa16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 ACSS1Q9NUB1 689 aaPredicted RBP16.33■□□□□ 0.21
NOTCH3-201ENST00000263388 IGKV6-21A0A0C4DH24 114 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 HMGN2P05204 90 aaKnown RBP16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 PPP3CBP16298 524 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 PRLHRP49683 370 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 PGGHGQ32M88 737 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 RTP2Q5QGT7 225 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 NRG4Q8WWG1 115 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 OR7D2Q96RA2 312 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 HAPLN2Q9GZV7 340 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 GPR160Q9UJ42 338 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 MYLKQ15746 1914 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 COL11A1P12107 1806 aaPredicted RBP16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 IGKV6D-21A0A0A0MT36 114 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC22A23A1A5C7 686 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 TNFRSF10AO00220 468 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 CST9LP1Q5W188 147 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 CD300LGQ6UXG3 332 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 PSMF1Q92530 271 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 IL17CQ9P0M4 197 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 NENFQ9UMX5 172 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 VDAC3Q9Y277 283 aa16.33■□□□□ 0.2
NOTCH3-201ENST00000263388 AOAHP28039 575 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms