RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZFP64Q9NPA5 681 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 KRCC1Q9NPI7 259 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 CMC2Q9NRP2 79 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 SPATA2Q9UM82 520 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 DTX4Q9Y2E6 619 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 COLEC10Q9Y6Z7 277 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 MEIS3P1A6NDR6 274 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 SLC22A31A6NKX4 558 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 BLOC1S5-TXNDC5H3BN57 136 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 RCBTB2O95199 551 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 CFDP00746 253 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 NID1P14543 1247 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 UGT2B7P16662 529 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 VEGFCP49767 419 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 UBE2MP61081 183 aaKnown RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 MAT1AQ00266 395 aaKnown RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 C1orf61Q13536 156 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 GPR18Q14330 331 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 ZNF267Q14586 743 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 FIGLAQ6QHK4 219 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 ZNF680Q8NEM1 530 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR2T35Q8NGX2 323 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR51Q1Q8NH59 317 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 FGF14Q92915 247 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 PELI1Q96FA3 418 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 NOX4Q9NPH5 578 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 HCN3Q9P1Z3 774 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 ING1Q9UK53 422 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 COPS3Q9UNS2 423 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 TRABD2BA6NFA1 517 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 FLRT2O43155 660 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 GPANK1O95872 356 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 CELA2BP08218 269 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 RPS15P62841 145 aaKnown RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 DUSP8Q13202 625 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 CLPPQ16740 277 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 SLC25A25Q6KCM7 469 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 PARM1Q6UWI2 310 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 Q6ZTK2 550 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 FCRLAQ7L513 359 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 LUZP2Q86TE4 346 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 CMTM4Q8IZR5 234 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR9A4Q8NGU2 314 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 BRIX1Q8TDN6 353 aaKnown RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 MSANTD3Q96H12 275 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR2M4Q96R27 311 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 OR2A5Q96R48 311 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 LMF1Q96S06 567 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 PITHD1Q9GZP4 211 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 TCEAL2Q9H3H9 227 aaPredicted RBP8.41□□□□□ -1.06
MSH4-201ENST00000263187 GHITMQ9H3K2 345 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 TRPV4Q9HBA0 871 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 MED17Q9NVC6 651 aa8.41□□□□□ -1.06
MSH4-201ENST00000263187 ARID1AO14497 2285 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 DOK2O60496 412 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 DBIP07108 87 aaKnown RBP8.4□□□□□ -1.06
MSH4-201ENST00000263187 EPXP11678 715 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 RBMS1P29558 406 aaKnown RBP8.4□□□□□ -1.06
MSH4-201ENST00000263187 GDNFP39905 211 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 PER3P56645 1201 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 TOR2AQ5JU69 321 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 KIAA1324Q6UXG2 1013 aaKnown RBP8.4□□□□□ -1.06
MSH4-201ENST00000263187 PRR23CQ6ZRP0 262 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 OR2T4Q8NH00 348 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 ACOT12Q8WYK0 555 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 SPACA7Q96KW9 195 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 HSPA12BQ96MM6 686 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 TIMM29Q9BSF4 260 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 ZNF350Q9GZX5 532 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 RSPH9Q9H1X1 276 aaPredicted RBP8.4□□□□□ -1.06
MSH4-201ENST00000263187 PIGUQ9H490 435 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 FOLH1BQ9HBA9 442 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 MCCC2Q9HCC0 563 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 NANSQ9NR45 359 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 LYARQ9NX58 379 aaKnown RBP8.4□□□□□ -1.06
MSH4-201ENST00000263187 SLC17A4Q9Y2C5 497 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 SLC35A3Q9Y2D2 325 aa8.4□□□□□ -1.06
MSH4-201ENST00000263187 C17orf51A8MQB3 221 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 PLPP2O43688 288 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 IGKV1D-16P01601 117 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 APODP05090 189 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 PROS1P07225 676 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 FBXO45P0C2W1 286 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 ANXA3P12429 323 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 HK1P19367 917 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 C5AR1P21730 350 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 DNASE1P24855 282 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 ADPRHP54922 357 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 POU6F2P78424 691 aaPredicted RBP8.4□□□□□ -1.07
MSH4-201ENST00000263187 EIPR1Q53HC9 387 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 ZBTB37Q5TC79 503 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 TIGD3Q6B0B8 471 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 FCRL6Q6DN72 434 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 PYHIN1Q6K0P9 492 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 TEX261Q6UWH6 196 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 CREB3L2Q70SY1 520 aa8.4□□□□□ -1.07
MSH4-201ENST00000263187 CCDC28AQ8IWP9 274 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms