RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 ZNF100Q8IYN0 542 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 NEUROG1Q92886 237 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 KISS1RQ969F8 398 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SMR3AQ99954 134 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 RSPO3Q9BXY4 272 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 ZNF443Q9Y2A4 671 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 ZNF716A6NP11 495 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SASH3O75995 380 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 TGDSO95455 350 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 PPP3CBP16298 524 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 HOXB9P17482 250 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 FPR1P21462 350 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SLC1A3P43003 542 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 OR3A2P47893 321 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 POLR2HP52434 150 aaKnown RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 CRISP3P54108 245 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 NKX6-1P78426 367 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SF3A3Q12874 501 aaKnown RBP eCLIP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 GNA13Q14344 377 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 BHLHA15Q7RTS1 189 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SERPINA11Q86U17 422 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 UBE2J2Q8N2K1 259 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SLC25A43Q8WUT9 341 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 PERPQ96FX8 193 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 CCL19Q99731 98 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 IKZF5Q9H5V7 419 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SLC52A3Q9NQ40 469 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 DCTN4Q9UJW0 460 aa12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 SPIN1Q9Y657 262 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-201ENST00000262829 CADP27708 2225 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 USF3Q68DE3 2245 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 DSPPQ9NZW4 1301 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 A0A096LPI6 279 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 A0A1W2PR80 420 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 CLOCKO15516 846 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 PMS2P2O95744 297 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 H2AFXP16104 143 aaPredicted RBP12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 NCF2P19878 526 aaPredicted RBP12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 IGHV1-2P23083 117 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 HOXC12P31275 282 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 FOXG1P55316 489 aaPredicted RBP12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 ITGADQ13349 1161 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 LIN52Q52LA3 116 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 BEX5Q5H9J7 111 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 C9orf135Q5VTT2 229 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 ABLIM2Q6H8Q1 611 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 Q6ZT83 130 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 Q71RC1 249 aaPredicted RBP12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 GALNT5Q7Z7M9 940 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 STEAP2Q8NFT2 490 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 NFKBIDQ8NI38 313 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 CKAP2Q8WWK9 683 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 OIT3Q8WWZ8 545 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 GP6Q9HCN6 339 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 FANCFQ9NPI8 374 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 TMEM181Q9P2C4 612 aa12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 NOSIPQ9Y314 301 aaKnown RBP12.87□□□□□ -0.35
RBFOX2-201ENST00000262829 ZANQ9Y493 2812 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 ZNF724A8MTY0 619 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 SMPD2O60906 423 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 AKR7A3O95154 331 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 CXCR1P25024 350 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 HTR3AP46098 478 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 TXNL4AP83876 142 aaKnown RBP12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 CEACAM7Q14002 265 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 OR7A5Q15622 319 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 C4orf46Q504U0 113 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 COMTD1Q86VU5 262 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 TACO1Q9BSH4 297 aaKnown RBP12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 CCDC28BQ9BUN5 200 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 HDHD5Q9BXW7 423 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 ADAM19Q9H013 955 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 NPHS2Q9NP85 383 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 CALML5Q9NZT1 146 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 VAPAQ9P0L0 249 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
RBFOX2-201ENST00000262829 A0A0G2JPF8 293 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 TMEM247A6NEH6 219 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 HNRNPCL2B2RXH8 293 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 HNRNPCL3B7ZW38 293 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 HNRNPCL1O60812 293 aaKnown RBP12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 RAD51DO75771 328 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 HNRNPCL4P0DMR1 293 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 P2RY6Q15077 328 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 Q5PR19 223 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 SEZ6L2Q6UXD5 910 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 JAZF1Q86VZ6 243 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 P3H2Q8IVL5 708 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 TMEM99Q8N816 258 aa12.85□□□□□ -0.35
RBFOX2-201ENST00000262829 LILRB1Q8NHL6 650 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms