RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 MAS1P04201 325 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 F13BP05160 661 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 AMY2BP19961 511 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 HTR5AP47898 357 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 RAB40BQ12829 278 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 ZNF750Q32MQ0 723 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 KCTD20Q7Z5Y7 419 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 TMED4Q7Z7H5 227 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 OR5W2Q8NH69 310 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 MFSD8Q8NHS3 518 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 SLC19A3Q9BZV2 496 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 MMP27Q9H306 513 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 ANKRD19PQ9H560 264 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 EXTL2Q9UBQ6 330 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 HTR3BO95264 441 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 WNT4P56705 351 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 CLPPQ16740 277 aaPredicted RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 NKPD1Q17RQ9 610 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 TRMT12Q53H54 448 aaKnown RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 FAM69AQ5T7M9 428 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 AWAT2Q6E213 333 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 ZNF322Q6U7Q0 402 aaPredicted RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 APH1AQ96BI3 265 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 ZNF775Q96BV0 537 aaPredicted RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 OBP2BQ9NPH6 170 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 ZNF175Q9Y473 711 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 CHP2O43745 196 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 LCMT2O60294 686 aaKnown RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 GPX2P18283 190 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 GIPRP48546 466 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 VASNQ6EMK4 673 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 XKRXQ6PP77 449 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 MKXQ8IYA7 352 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 ZNF683Q8IZ20 524 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 SLC43A2Q8N370 569 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 MOKQ9UQ07 419 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 PMS2P1A4D2B8 440 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 SURF4O15260 269 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 RAB3AP20336 220 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 MBOAT2Q6ZWT7 520 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 MARVELD2Q8N4S9 558 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 OR5D14Q8NGL3 314 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 TSLPQ969D9 159 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 RSPRY1Q96DX4 576 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 KATNB1Q9BVA0 655 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 QRSL1Q9H0R6 528 aaKnown RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 DUSP15Q9H1R2 295 aaPredicted RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 ZNF850A8MQ14 1090 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 KDM4EB2RXH2 506 aaPredicted RBP12.88□□□□□ -0.35
CDH1-201ENST00000261769 ACTL6BO94805 426 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 CHRNB1P11230 501 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 MYF5P13349 255 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 RAB3BP20337 219 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 ELAVL4P26378 380 aaKnown RBP12.88□□□□□ -0.35
CDH1-201ENST00000261769 LCN1P31025 176 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 ZFP69Q49AA0 526 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 XKR7Q5GH72 579 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 NDUFAF7Q7L592 441 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 MNTQ99583 582 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 C1orf198Q9H425 327 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 SLAMF8Q9P0V8 285 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 COL4A1P02462 1669 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 QSER1Q2KHR3 1735 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 CD8B2A6NJW9 211 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 TMPRSS11DO60235 418 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 KLK8O60259 260 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 CD8BP10966 210 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 GNRHRP30968 328 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 MAP2K4P45985 399 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 ART1P52961 327 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 TMBIM6P55061 237 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 DUSP5Q16690 384 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 C22orf42Q6IC83 251 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 NT5CQ8TCD5 201 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 MED17Q9NVC6 651 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 RABL2AQ9UBK7 228 aaPredicted RBP12.88□□□□□ -0.35
CDH1-201ENST00000261769 ZNF221Q9UK13 617 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 RABL2BQ9UNT1 228 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 NUP205Q92621 2012 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 IGLV3-16A0A075B6K0 115 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 A0A087WV62 115 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 TMEM269A0A1B0GVZ9 245 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 SMIM30A4D0T7 59 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 PEX14O75381 377 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 NPR2P20594 1047 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
CDH1-201ENST00000261769 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 C1orf140Q5VVS0 124 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 ZNF813Q6ZN06 617 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 MEPCEQ7L2J0 689 aaKnown RBP12.88□□□□□ -0.35
CDH1-201ENST00000261769 ABI3BPQ7Z7G0 1075 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 OR4D9Q8NGE8 314 aa12.88□□□□□ -0.35
CDH1-201ENST00000261769 ZNF583Q96ND8 569 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms