RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 BTCP35070 178 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SHC2P98077 582 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ODF4Q2M2E3 257 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 AMZ1Q400G9 498 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 PRAMEF8Q5VWM4 474 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 PRAMEF7Q5VXH5 474 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 FAAH2Q6GMR7 532 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF761Q86XN6 746 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF527Q8NB42 609 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ERVMER34-1Q9H9K5 563 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF224Q9NZL3 707 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC35A3Q9Y2D2 325 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ASCC3Q8N3C0 2202 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 CTSVO60911 334 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC22A5O76082 557 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 WNT1P04628 370 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF250P15622 560 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 NDUFS1P28331 727 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 GDI2P50395 445 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF85Q03923 595 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ST3GAL2Q16842 350 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC36A2Q495M3 483 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 GPALPP1Q8IXQ4 340 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF619Q8N2I2 560 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 LNX2Q8N448 690 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 LRRC20Q8TCA0 184 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 LGALS14Q8TCE9 139 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 KISS1RQ969F8 398 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 YIPF5Q969M3 257 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 METTL17Q9H7H0 456 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SIGLEC7Q9Y286 467 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 COLEC10Q9Y6Z7 277 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ARID1AO14497 2285 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 TRABD2BA6NFA1 517 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 HPXP02790 462 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 CPMP14384 443 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 HK1P19367 917 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 ENPP1P22413 925 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 PTBP1P26599 531 aaKnown RBP eCLIP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 MAOBP27338 520 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 PER3P56645 1201 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 BTG1P62324 171 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 ACSM1Q08AH1 577 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 WDR45BQ5MNZ6 344 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 FBXO42Q6P3S6 717 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 TEX261Q6UWH6 196 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 C10orf90Q96M02 699 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 GHITMQ9H3K2 345 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 NARFLQ9H6Q4 476 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 RANBP3Q9H6Z4 567 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 ADGRL4Q9HBW9 690 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 ZFP64Q9NPA5 681 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 LYARQ9NX58 379 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 CYP8B1Q9UNU6 501 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 RCE1Q9Y256 329 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 U3KQ87 197 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 GPR179Q6PRD1 2367 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 PLPP2O43688 288 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 GMFGO60234 142 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 FGF17O60258 216 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 RASGRP1O95267 797 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 EEF1A1P68104 462 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 TNFRSF17Q02223 184 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 NDUFAF6Q330K2 333 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 ARHGAP11BQ3KRB8 267 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 PRRT3Q5FWE3 981 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 TOR2AQ5JU69 321 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 CHMP1BQ7LBR1 199 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 LIX1LQ8IVB5 337 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 BRIX1Q8TDN6 353 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 PATE1Q8WXA2 126 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 GAL3ST3Q96A11 431 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 PDGFBP01127 241 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 DBIP07108 87 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 NID1P14543 1247 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 SOX2P48431 317 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC25A25Q6KCM7 469 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 TSSK4Q6SA08 328 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 MED30Q96HR3 178 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 APOOQ9BUR5 198 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF346Q9UL40 294 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-201ENST00000261674 A0A1W2PQF6 199 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 GDNFP39905 211 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 PPP2CBP62714 309 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 PPP2CAP67775 309 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 STX4Q12846 297 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 DUSP8Q13202 625 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 HYAL4Q2M3T9 481 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 ALG10BQ5I7T1 473 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 FTMTQ8N4E7 242 aa13.33□□□□□ -0.28
SFSWAP-201ENST00000261674 TMEM52Q8NDY8 209 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms