RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 FAM183AA6NL82 134 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 BBIP1A8MTZ0 92 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 NPPAP01160 153 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ALBP02768 609 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CTSEP14091 401 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SOX8P57073 446 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 OR5M10Q6IEU7 315 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 KRTAP1-3Q8IUG1 177 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC38A4Q969I6 547 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PPP3R2Q96LZ3 170 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 APOL4Q9BPW4 351 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CNPPD1Q9BV87 410 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 OR11A1Q9GZK7 315 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 RNF32Q9H0A6 362 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF700Q9H0M5 742 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ADGRL4Q9HBW9 690 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SEMA3GQ9NS98 782 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ANGPT4Q9Y264 503 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CFL2Q9Y281 166 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 AQP12BA6NM10 295 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CENPXA8MT69 81 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 TOR1BO14657 336 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PORP16435 677 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 GRNP28799 593 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 DDOSTP39656 456 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 COPZ1P61923 177 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 NADK2Q4G0N4 442 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PDZK1Q5T2W1 519 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ERICH5Q6P6B1 374 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CHMP1BQ7LBR1 199 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SZRD1Q7Z422 152 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SYT9Q86SS6 491 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ASPGQ86U10 573 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 AQP12AQ8IXF9 295 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 EFHD2Q96C19 240 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 GPX7Q96SL4 187 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 LPAR4Q99677 370 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 MRPS30Q9NP92 439 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 IGKV1-27A0A075B6S5 117 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PNMA8CA0A1B0GUJ8 204 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 GPX5O75715 221 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 BCHEP06276 602 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 OTX1P32242 354 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CASRP41180 1078 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 MAP2K4P45985 399 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CHRNB3Q05901 458 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 C2orf80Q0P641 193 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 DCTN2Q13561 401 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 GANABQ14697 944 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 TRIP10Q15642 601 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SPIN4Q56A73 249 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CSNK1A1LQ8N752 337 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 EXOSC8Q96B26 276 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 KCNC2Q96PR1 638 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CLCC1Q96S66 551 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 CDADC1Q9BWV3 514 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ELOVL6Q9H5J4 265 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 NRIP3Q9NQ35 241 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 AURKCQ9UQB9 309 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PCDHGB2Q9Y5G2 931 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 FBXO45P0C2W1 286 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PRKCAP17252 672 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 GSTM5P46439 218 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 LHX2P50458 406 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PRR5P85299 388 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 MAD2L1BPQ15013 274 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 KDM8Q8N371 416 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 OR5M1Q8NGP8 315 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 GGHQ92820 318 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC22A18Q96BI1 424 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 BRD7Q9NPI1 651 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 MIEF1Q9NQG6 463 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 FAM120CQ9NX05 1096 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ADA2Q9NZK5 511 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 PPP4R1LQ9P1A2 415 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 SUSD2Q9UGT4 822 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ITGB1BP2Q9UKP3 347 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 ERVK-19Q9WJR5 959 aa5.02□□□□□ -1.61
TOPBP1-201ENST00000260810 IGKV1-9A0A0C4DH69 117 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 F8VVB4 439 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 F8VWA3 439 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 DOK2O60496 412 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 CTNSO60931 367 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 HIST1H2ABP04908 130 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC35E2P0CK97 266 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 HSD11B2P80365 405 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 Q6ZR03 302 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 FOXL2NBQ6ZUU3 175 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 HIST3H2AQ7L7L0 130 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 FAM220AQ7Z4H9 259 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 DEPDC4Q8N2C3 294 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 FAM109AQ8N4B1 249 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 HIST1H2ACQ93077 130 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SCMH1Q96GD3 660 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 GNRHR2Q96P88 292 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 OSBPL11Q9BXB4 747 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 FAM192AQ9GZU8 254 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 OSGEPL1Q9H4B0 414 aa5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 PRR23D1E9PI22 279 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-201ENST00000260810 SCGB2A1O75556 95 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms