RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 Q6ZNX1 250 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF554Q86TJ5 538 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 SMYD1Q8NB12 490 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 OR13F1Q8NGS4 319 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 OR5W2Q8NH69 310 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 GPR119Q8TDV5 335 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 MUS81Q96NY9 551 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 BCL2L10Q9HD36 194 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 FAIMQ9NVQ4 179 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 A0A1W2PPW3 197 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 CLDN24A6NM45 220 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 SHISA8B8ZZ34 492 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 PEPDP12955 493 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF708P17019 499 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF17P17021 662 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 MTPNP58546 118 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 SRYQ05066 204 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 CBFBQ13951 182 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 SF3B4Q15427 424 aaKnown RBP eCLIP15.13■□□□□ 0.016e-7■■■■■ 30.8
SDCBP-201ENST00000260130 RPS26P11Q5JNZ5 115 aaPredicted RBP15.13■□□□□ 0.01
SDCBP-201ENST00000260130 PRAMEF8Q5VWM4 474 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 PRAMEF7Q5VXH5 474 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 TTC23Q5W5X9 447 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 RPTNQ6XPR3 784 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 STK32CQ86UX6 486 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 CMIPQ8IY22 773 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 GTPBP8Q8N3Z3 284 aaPredicted RBP15.13■□□□□ 0.01
SDCBP-201ENST00000260130 FAM71CQ8NEG0 241 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 OR52P1PQ8NH57 321 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 ARSGQ96EG1 525 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 TMEM38AQ9H6F2 299 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 GORASP2Q9H8Y8 452 aa15.13■□□□□ 0.01
SDCBP-201ENST00000260130 CHCHD3Q9NX63 227 aaKnown RBP15.13■□□□□ 0.01
SDCBP-201ENST00000260130 C5orf58C9J3I9 102 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 GSTA4O15217 222 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 ARAFP10398 606 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 POU3F2P20265 443 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 EIF1P41567 113 aaKnown RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 CCR4P51679 360 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 SMSP52788 366 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 CLDN18P56856 261 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 PMPCAQ10713 525 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 SELPLGQ14242 412 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 THAP5Q7Z6K1 395 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 MRGPRGQ86SM5 289 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 ZDHHC13Q8IUH4 622 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 C8orf59Q8N0T1 100 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 TBC1D15Q8TC07 691 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 ZPLD1Q8TCW7 415 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 NPAS1Q99742 590 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 TTYH2Q9BSA4 534 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 AP3M1Q9Y2T2 418 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 H3BML4 177 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 NID1P14543 1247 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 CCNA2P20248 432 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 YAP1P46937 504 aaKnown RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 CDK6Q00534 326 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 TOMM34Q15785 309 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 ZIK1Q3SY52 487 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 FGD3Q5JSP0 725 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 OR2T12Q8NG77 320 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 NFKBIDQ8NI38 313 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 ITLN2Q8WWU7 325 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 KAT8Q9H7Z6 458 aaKnown RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 DNAJB9Q9UBS3 223 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 GPC6Q9Y625 555 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-201ENST00000260130 MYO7BQ6PIF6 2116 aa15.12■□□□□ 0.01
SDCBP-201ENST00000260130 G3V2T6 193 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 BCAS1O75363 584 aaPredicted RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 SEC14L2O76054 403 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 EPPINO95925 133 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 HNRNPCP07910 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 GLI4P10075 376 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 ELK4P28324 431 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 MOGQ16653 247 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 ACSF3Q4G176 576 aaPredicted RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 REEP3Q6NUK4 255 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 VRK2Q86Y07 508 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 SVOPLQ8N434 492 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF555Q8NEP9 628 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 BBS10Q8TAM1 723 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 POC1BQ8TC44 478 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 RND1Q92730 232 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 HDAC2Q92769 488 aaKnown RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF583Q96ND8 569 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 PSMG3-AS1Q96PY0 264 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 SH3GL1Q99961 368 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 CACYBPQ9HB71 228 aaKnown RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 EXOSC3Q9NQT5 275 aaKnown RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF232Q9UNY5 417 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 DOPEY1Q5JWR5 2465 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 PCNX3Q9H6A9 2034 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 MAGEB3O15480 346 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 PGCP20142 388 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 ADH6P28332 368 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 PLAURQ03405 335 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 LARS2Q15031 903 aaKnown RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 MRPL2Q5T653 305 aaKnown RBP15.11■□□□□ 0.01
SDCBP-201ENST00000260130 XKRXQ6PP77 449 aa15.11■□□□□ 0.01
SDCBP-201ENST00000260130 UBQLNLQ8IYU4 475 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms