RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 C1QL3Q5VWW1 255 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 TTC33Q6PID6 262 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNF730Q6ZMV8 503 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 PFN4Q8NHR9 129 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 FAR1Q8WVX9 515 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 SMPDL3BQ92485 455 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 KTI12Q96EK9 354 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 DNAJA3Q96EY1 480 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 HS6ST2Q96MM7 605 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 TMEM43Q9BTV4 400 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 EXO5Q9H790 373 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 ASF1BQ9NVP2 202 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 STX18Q9P2W9 335 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 TNFRSF10DQ9UBN6 386 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 MAGED1Q9Y5V3 778 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 IGSF10Q6WRI0 2623 aa14.24□□□□□ -0.13
CCDC90B-201ENST00000260054 A0A1B0GVC2 190 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 A8MVM7 634 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 LINC01387J3KSC0 135 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 POU3F2P20265 443 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 LHX2P50458 406 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 MAP2K6P52564 334 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 NFATC3Q12968 1075 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 TMEM176BQ3YBM2 270 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 NHSL2Q5HYW2 709 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 NRMQ8IXM6 262 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 ICA1LQ8NDH6 482 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 OR4K5Q8NGD3 323 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 SLC25A43Q8WUT9 341 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 ABTB1Q969K4 478 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 GPR137Q96N19 417 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 RNPEPL1Q9HAU8 725 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 C20orf141Q9NUB4 165 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 C6orf203Q9P0P8 240 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 TMCC3Q9ULS5 477 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 SPIN1Q9Y657 262 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 MPDZO75970 2070 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 TTLL8A6PVC2 850 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 H0YC42 278 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNHIT1O43257 154 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 TFPIP10646 304 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 TDGF1P3P51864 188 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 TPD52P55327 224 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 CLDN20P56880 219 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 CRYZQ08257 329 aaKnown RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 GK3PQ14409 553 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 MICAQ29983 383 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 C1orf140Q5VVS0 124 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 VASNQ6EMK4 673 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 SHQ1Q6PI26 577 aaKnown RBP14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 MBOAT2Q6ZWT7 520 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 GGNQ86UU5 652 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 OR9Q2Q8NGE9 314 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 STK35Q8TDR2 534 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 DDIT4LQ96D03 193 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 SLX1AQ9BQ83 275 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 PTDSS2Q9BVG9 487 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 SLC19A3Q9BZV2 496 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 OAZ3Q9UMX2 235 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 MED31Q9Y3C7 131 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 AP4B1Q9Y6B7 739 aa14.23□□□□□ -0.13
CCDC90B-201ENST00000260054 A0A1B0GTH9 108 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 A0A1W2PNR3 127 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 SAC3D1A6NKF1 404 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 AQP7O14520 342 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 SEC14L5O43304 696 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 CCNB2O95067 398 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 ATP6V1G2O95670 118 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 ACTL6AO96019 429 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNF708P17019 499 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNF23P17027 643 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 PRKACGP22612 351 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 GCKP35557 465 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 RPS5P46782 204 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 SUCLG1P53597 346 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 CLDN15P56746 228 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 CLDN18P56856 261 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 CTU2Q2VPK5 515 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 ZNF770Q6IQ21 691 aaPredicted RBP14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 RRM2BQ7LG56 351 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 PRICKLE2Q7Z3G6 844 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 MEX3DQ86XN8 651 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 EPHX4Q8IUS5 362 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 UBQLNLQ8IYU4 475 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 RNF113BQ8IZP6 322 aaKnown RBP14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 OR5K1Q8NHB7 308 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 KLHL15Q96M94 604 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 OR5B2Q96R09 309 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 TIMP4Q99727 224 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 COQ10BQ9H8M1 238 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 PDP1Q9P0J1 537 aaPredicted RBP14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 SVILO95425 2214 aa14.22□□□□□ -0.13
CCDC90B-201ENST00000260054 A0A0J9YW62 118 aa14.21□□□□□ -0.13
CCDC90B-201ENST00000260054 ENO4A6NNW6 628 aa14.21□□□□□ -0.13
CCDC90B-201ENST00000260054 LRRN3E7EW58 273 aa14.21□□□□□ -0.13
CCDC90B-201ENST00000260054 OR10H3O60404 316 aa14.21□□□□□ -0.13
CCDC90B-201ENST00000260054 FKBP2P26885 142 aaKnown RBP14.21□□□□□ -0.13
CCDC90B-201ENST00000260054 PRKCDQ05655 676 aa14.21□□□□□ -0.13
CCDC90B-201ENST00000260054 MYBPHQ13203 477 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms