RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 UBL3O95164 117 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 ZNF682O95780 498 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 HLA-DPB1P04440 258 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 NR2F6P10588 404 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 ZNF35P13682 527 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 RAB5AP20339 215 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 NDUFS1P28331 727 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MPIP34949 423 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 GDNFP39905 211 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 SRP9P49458 86 aaKnown RBP10.96□□□□□ -0.65
CCNA1-201ENST00000255465 DGKGP49619 791 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 FOXA1P55317 472 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 AP3S2P59780 193 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MEF2AQ02078 507 aaPredicted RBP10.96□□□□□ -0.65
CCNA1-201ENST00000255465 LMAN2Q12907 356 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MTAPQ13126 283 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 RSU1Q15404 277 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 SLC25A30Q5SVS4 291 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 DCXRQ7Z4W1 244 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 LRRTM4Q86VH4 590 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 FAM131BQ86XD5 332 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MSRB3Q8IXL7 192 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 LAS2Q8IYD9 372 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 CDK20Q8IZL9 346 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 UBAC2Q8NBM4 344 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MFSD9Q8NBP5 474 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 HSD17B11Q8NBQ5 300 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 CHST14Q8NCH0 376 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MDGA1Q8NFP4 955 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 OR5T1Q8NG75 326 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 BBS10Q8TAM1 723 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 C1GALT1C1Q96EU7 318 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 TCTN2Q96GX1 697 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 WFIKKN1Q96NZ8 548 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 FCRL5Q96RD9 977 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 FEVQ99581 238 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 RIOK2Q9BVS4 552 aaKnown RBP10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MFFQ9GZY8 342 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 UBQLN3Q9H347 655 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 PTGES2Q9H7Z7 377 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MMP26Q9NRE1 261 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 TMPRSS4Q9NRS4 437 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 MAN2C1Q9NTJ4 1040 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 TMEM248Q9NWD8 314 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 KLHL8Q9P2G9 620 aaPredicted RBP10.96□□□□□ -0.65
CCNA1-201ENST00000255465 SLC9A8Q9Y2E8 581 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 PTGDR2Q9Y5Y4 395 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 WDFY4Q6ZS81 3184 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 FANCMQ8IYD8 2048 aa10.96□□□□□ -0.65
CCNA1-201ENST00000255465 TBC1D3BA6NDS4 549 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 NPIPB8E9PQR5 432 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 F5H5T6 163 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 EEF1E1O43324 174 aaKnown RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 EMC8O43402 210 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 LANCL1O43813 399 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 OR2F2O95006 317 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 RAB36O95755 333 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 GUSBP08236 651 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 SYPP08247 313 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 ITGA5P08648 1049 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 PSMB1P20618 241 aaKnown RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 PRPS1L1P21108 318 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 BMI1P35226 326 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 TNFRSF4P43489 277 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 PPM1FP49593 454 aaPredicted RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 WNT4P56705 351 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 LSM6P62312 80 aaKnown RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 RPS24P62847 133 aaKnown RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 VLDLRP98155 873 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 SRSF5Q13243 272 aaKnown RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 SNTB2Q13425 540 aaKnown RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 OR2F1Q13607 317 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 VEZF1Q14119 521 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 NDUFA9Q16795 377 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 ZSWIM7Q19AV6 140 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 ZNF648Q5T619 568 aaPredicted RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 HBMQ6B0K9 141 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 CLEC9AQ6UXN8 241 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 RPS27LQ71UM5 84 aaKnown RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 TECPR1Q7Z6L1 1165 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 SIAH3Q8IW03 269 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 CFAP52Q8N1V2 620 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 LRRC18Q8N456 261 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 KCNRGQ8N5I3 272 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 HJURPQ8NCD3 748 aaPredicted RBP10.95□□□□□ -0.66
CCNA1-201ENST00000255465 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 UQCC1Q9NVA1 299 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 GPATCH2LQ9NWQ4 482 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 SLC25A37Q9NYZ2 338 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 ZDHHC8Q9ULC8 765 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 SLC27A6Q9Y2P4 619 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 TMED3Q9Y3Q3 217 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 HS3ST4Q9Y661 456 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 POMT1Q9Y6A1 747 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 EML5Q05BV3 1969 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 A0A0U1RQV5 110 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 H0YIV9 168 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 TNFRSF11BO00300 401 aa10.95□□□□□ -0.66
CCNA1-201ENST00000255465 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms