RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GPR139Q6DWJ6 353 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 CXorf36Q9H7Y0 433 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC6A20Q9NP91 592 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 MBNL1Q9NR56 388 aaKnown RBP17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 HHLA2Q9UM44 414 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 HS3ST2Q9Y278 367 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 NRXN3Q9Y4C0 1643 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 TCRBV3S1A0A5B6 114 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 SNIP1Q8TAD8 396 aaKnown RBP17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 COQ10AQ96MF6 247 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 FOXQ1Q9C009 403 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 IL13RA1P78552 427 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 RSPRY1Q96DX4 576 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 ZBP1Q9H171 429 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 SCN11AQ9UI33 1791 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 LINC01553A4QN01 128 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 CD300LBA8K4G0 201 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 F8W036 122 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 IGHV3-9P01782 118 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 RAB6AP20340 208 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 RAB38P57729 211 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 BLOC1S1P78537 153 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 LTBQ06643 244 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 GPR19Q15760 415 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 MED25Q71SY5 747 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 NMNAT3Q96T66 252 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 SAV1Q9H4B6 383 aaPredicted RBP17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 ARGFXA6NJG6 315 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 GFRA2O00451 464 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 CTDSP2O14595 271 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 TRIM61Q5EBN2 209 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 RTN4RL1Q86UN2 441 aaPredicted RBP17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF679Q8IYX0 411 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 AGBL5Q8NDL9 886 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 HHATLQ9HCP6 504 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 BABAM2Q9NXR7 383 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 SNRPBP14678 240 aaKnown RBP17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 CST5P28325 142 aaPredicted RBP17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC5A2P31639 672 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 CD79BP40259 229 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 VEGFCP49767 419 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 DYRK1AQ13627 763 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 TLDC1Q6P9B6 456 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 TMEM255BQ8WV15 326 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 GABRPO00591 440 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 LILRB5O75023 590 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 DAPP51397 102 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF674Q2M3X9 581 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 TSSK4Q6SA08 328 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 SBSNQ6UWP8 590 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 SPPL3Q8TCT6 385 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 KHSRPQ92945 711 aaKnown RBP eCLIP17.38■□□□□ 0.374e-7■■■□□ 17.4
SMARCC1-201ENST00000254480 NAT6Q93015 286 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 ARL5BQ96KC2 179 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 TOX2Q96NM4 488 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 EHFQ9NZC4 300 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC6A5Q9Y345 797 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 HSF5Q4G112 596 aaPredicted RBP17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 AGAP7PQ5VUJ5 663 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 AGAP6Q5VW22 663 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 AGAP4Q96P64 663 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 SERTAD4Q9NUC0 356 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 NXPH3O95157 252 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 FCGR2AP12318 317 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF91Q05481 1191 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 C12orf49Q9H741 205 aa17.38■□□□□ 0.37
SMARCC1-201ENST00000254480 CD46P15529 392 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 POU4F3Q15319 338 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 CNN3Q15417 329 aaKnown RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 TMEM244Q5VVB8 128 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 KCTD11Q693B1 232 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 OR52W1Q6IF63 320 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 GLB1L2Q8IW92 636 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 KDM8Q8N371 416 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 HYLS1Q96M11 299 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 WWTR1Q9GZV5 400 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 FGF21Q9NSA1 209 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 PTAFRP25105 342 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 HOXC13P31276 330 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 TGFBR3Q03167 851 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 ANKLE1Q8NAG6 615 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 FRZBQ92765 325 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 CPPED1Q9BRF8 314 aaPredicted RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 TWSG1Q9GZX9 223 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC6A14Q9UN76 642 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 HHLA1C9JL84 531 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 TRAPPC2LH3BP13 241 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 TAPBPO15533 448 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 OR7C1O76099 320 aaPredicted RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 HTR3AP46098 478 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 TRA2BP62995 288 aaKnown RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 OPN5Q6U736 354 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 SLCO4C1Q6ZQN7 724 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 MARCH3Q86UD3 253 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 BBS1Q8NFJ9 593 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 PATE1Q8WXA2 126 aa17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF587Q96SQ5 575 aaPredicted RBP17.37■□□□□ 0.37
SMARCC1-201ENST00000254480 PBDC1Q9BVG4 233 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms