RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 SEC13P55735 322 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 EIF2S3LQ2VIR3 472 aaKnown RBP12.36□□□□□ -0.43
CCDC117-201ENST00000249064 NXPE4Q6UWF7 544 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 SEZ6L2Q6UXD5 910 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 JAGN1Q8N5M9 183 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 JAM3Q9BX67 310 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 UPB1Q9UBR1 384 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 FTSJ1Q9UET6 329 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 ITGA10O75578 1167 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 PRNPP04156 253 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 RPN2P04844 631 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 EPCAMP16422 314 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 CD34P28906 385 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 MAGEB1P43366 347 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 TM4SF4P48230 202 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 WNT3P56703 355 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 TPBGQ13641 420 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF600Q6ZNG1 722 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 TMEM99Q8N816 258 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 UBTD2Q8WUN7 234 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 TMED6Q8WW62 240 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 DCUN1D4Q92564 292 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 DMRT3Q9NQL9 472 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 TRBV5-4A0A0C4DH59 114 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 H7C1Q1 480 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 RNASET2O00584 256 aaKnown RBP12.35□□□□□ -0.43
CCDC117-201ENST00000249064 PPM1DO15297 605 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 PTP4A3O75365 173 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ARAFP10398 606 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 LSSP48449 732 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 SQSTM1Q13501 440 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 MPEG1Q2M385 716 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 TMEM107Q6UX40 140 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 OR52E4Q8NGH9 312 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 FBLIM1Q8WUP2 373 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF629Q9UEG4 869 aaPredicted RBP12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF236Q9UL36 1845 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ZSWIM8A7E2V4 1837 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 RHPN2P1A8MT19 583 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 WRBO00258 174 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 LATS1O95835 1130 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 SFTPBP07988 381 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 GKN3PP0CG01 181 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 CXCL2P19875 107 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 FABP9Q0Z7S8 132 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 MANEAQ5SRI9 462 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 CNKSR3Q6P9H4 555 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 TMEM91Q6ZNR0 172 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 SLCO4C1Q6ZQN7 724 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 PRICKLE2Q7Z3G6 844 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 OR52H1Q8NGJ2 320 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 TRMT2BQ96GJ1 504 aaKnown RBP12.35□□□□□ -0.43
CCDC117-201ENST00000249064 PIGQQ9BRB3 760 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 GHITMQ9H3K2 345 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 FBRSQ9HAH7 460 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 CA10Q9NS85 328 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 MCRIP1C9JLW8 97 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 C1orf105O95561 183 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 LIMS3P0CW19 117 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 LIMS4P0CW20 117 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 PIPP12273 146 aaPredicted RBP12.35□□□□□ -0.43
CCDC117-201ENST00000249064 FUT1P19526 365 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 EIF2B1Q14232 305 aaKnown RBP12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF750Q32MQ0 723 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF585AQ6P3V2 769 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF322Q6U7Q0 402 aaPredicted RBP12.35□□□□□ -0.43
CCDC117-201ENST00000249064 VRK2Q86Y07 508 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 OR4N5Q8IXE1 308 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 DNAAF1Q8NEP3 725 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 OR7G2Q8NG99 324 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 OR52E2Q8NGJ4 325 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 CAMK1GQ96NX5 476 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 HRASLSQ9HDD0 168 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 FAM96BQ9Y3D0 163 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF780BQ9Y6R6 833 aa12.35□□□□□ -0.43
CCDC117-201ENST00000249064 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 SULT1C2O00338 296 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 SLC16A5O15375 505 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 CRYBA1P05813 215 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 ADH5P11766 374 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 RGS19P49795 217 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 CCR9P51686 369 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 CLDN2P57739 230 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 PON3Q15166 354 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 TMEM44Q2T9K0 475 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 RHOUQ7L0Q8 258 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 STEAP2Q8NFT2 490 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 THEM6Q8WUY1 208 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 PMM1Q92871 262 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF707Q96C28 371 aaPredicted RBP12.34□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF75AQ96N20 296 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 ARHGAP9Q9BRR9 750 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 SLC38A1Q9H2H9 487 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
CCDC117-201ENST00000249064 CYSLTR2Q9NS75 346 aa12.34□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF860A6NHJ4 632 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms