RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 C12orf10Q9HB07 376 aa11.38□□□□□ -0.59
VPREB3-201ENST00000248948 EMC3Q9P0I2 261 aa11.38□□□□□ -0.59
VPREB3-201ENST00000248948 TMEM181Q9P2C4 612 aa11.38□□□□□ -0.59
VPREB3-201ENST00000248948 TRAPPC4Q9Y296 219 aa11.38□□□□□ -0.59
VPREB3-201ENST00000248948 OTOGQ6ZRI0 2925 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 IGHV3-15A0A0B4J1V0 119 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 TMEM72A0PK05 275 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 TMEM229AB2RXF0 380 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 C16orf97H3BN30 126 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 EIF1BO60739 113 aaKnown RBP11.37□□□□□ -0.59
VPREB3-201ENST00000248948 CCDC22O60826 627 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 YES1P07947 543 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 PRG2P13727 222 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 PPP3CBP16298 524 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 IDUAP35475 653 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 KCNJ5P48544 419 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 SLC16A1P53985 500 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 NCALDP61601 193 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 SLC35A1P78382 337 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 SNTB1Q13884 538 aaKnown RBP11.37□□□□□ -0.59
VPREB3-201ENST00000248948 SELPLGQ14242 412 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 CAPRIN1Q14444 709 aaKnown RBP11.37□□□□□ -0.59
VPREB3-201ENST00000248948 INTS11Q5TA45 600 aaKnown RBP11.37□□□□□ -0.59
VPREB3-201ENST00000248948 MTDHQ86UE4 582 aaKnown RBP11.37□□□□□ -0.59
VPREB3-201ENST00000248948 SNX32Q86XE0 403 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 ARMC8Q8IUR7 673 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 CADM2Q8N3J6 435 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 LSMEM1Q8N8F7 131 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 C3orf49Q96BT1 292 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 LRRC58Q96CX6 371 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 POTEKPQ9BYX7 375 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 OR11A1Q9GZK7 315 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 RASSF1Q9NS23 344 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 KLHL28Q9NXS3 571 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 NDRG3Q9UGV2 375 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 ING1Q9UK53 422 aaPredicted RBP11.37□□□□□ -0.59
VPREB3-201ENST00000248948 CREBBPQ92793 2442 aa11.37□□□□□ -0.59
VPREB3-201ENST00000248948 A8MVM7 634 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 FRS3O43559 492 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 MFN2O95140 757 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 CNOT4O95628 575 aaKnown RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 PSMB1P20618 241 aaKnown RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 CXCR1P25024 350 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 AQP1P29972 269 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 KRTAP10-9P60411 292 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 H3F3AP84243 136 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 FAM27E3Q08E93 113 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 RASGEF1BQ0VAM2 473 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 ERICH5Q6P6B1 374 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 PAQR6Q6TCH4 344 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 C5orf46Q6UWT4 87 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 SPATA21Q7Z572 469 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 ARPINQ7Z6K5 226 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 PATL1Q86TB9 770 aaKnown RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 ATG4DQ86TL0 474 aaPredicted RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 CDH24Q86UP0 819 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 TUSC5Q8IXB3 177 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 GABRG1Q8N1C3 465 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 RP9Q8TA86 221 aaKnown RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 LINC01560Q8TB33 94 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 RASSF5Q8WWW0 418 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 GPATCH1Q9BRR8 931 aaKnown RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 CLEC4MQ9H2X3 399 aaPredicted RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 C12orf49Q9H741 205 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 GID8Q9NWU2 228 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 ZNF226Q9NYT6 803 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 SLC13A4Q9UKG4 626 aa11.36□□□□□ -0.59
VPREB3-201ENST00000248948 RAI1Q7Z5J4 1906 aaPredicted RBP11.36□□□□□ -0.59
VPREB3-201ENST00000248948 CCDC168Q8NDH2 2452 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 ZC3H12DA2A288 527 aaKnown RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 ZNF716A6NP11 495 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 DYNC1I1O14576 645 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 GPR171O14626 319 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 FZD7O75084 574 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 NPIPB7O75200 414 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 GPIP06744 558 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 C8BP07358 591 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 IMPDH2P12268 514 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 CCNA2P20248 432 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 LSP1P33241 339 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 OR3A2P47893 321 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 GZMMP51124 257 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 RGS8P57771 180 aaPredicted RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 SF3A3Q12874 501 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 EXOC3L2Q2M3D2 409 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 VMACQ2NL98 169 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 FAM91A1Q658Y4 838 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 NANOGP8Q6NSW7 305 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 CCDC80Q76M96 950 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 NUFIP2Q7Z417 695 aaKnown RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 COMTD1Q86VU5 262 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 RANBP3LQ86VV4 465 aaPredicted RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 OR10A6Q8NH74 314 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 STK35Q8TDR2 534 aa11.35□□□□□ -0.59
VPREB3-201ENST00000248948 DNAJA4Q8WW22 397 aaPredicted RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 ZNF300Q96RE9 604 aaPredicted RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 NAA11Q9BSU3 229 aaPredicted RBP11.35□□□□□ -0.59
VPREB3-201ENST00000248948 MED18Q9BUE0 208 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms