RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CCDC3Q9BQI4 270 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 TRIM2Q9C040 744 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 FOLH1BQ9HBA9 442 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 MMP17Q9ULZ9 603 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 CLEC4AQ9UMR7 237 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 HS3ST3A1Q9Y663 406 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 CACNG2Q9Y698 323 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 EYSQ5T1H1 3165 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 SPTBP11277 2137 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.23□□□□□ -0.29
HIF3A-202ENST00000244303 AKR7A2O43488 359 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 SEMA4FO95754 770 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 IFI6P09912 130 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 S1PR1P21453 382 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 POU4F2Q12837 409 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 TNK1Q13470 666 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 PYHIN1Q6K0P9 492 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 SYT9Q86SS6 491 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 MS4A15Q8N5U1 240 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 LSMEM1Q8N8F7 131 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 FAM98AQ8NCA5 519 aaKnown RBP13.23□□□□□ -0.29
HIF3A-202ENST00000244303 OR13H1Q8NG92 308 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 FAM60AQ9NP50 221 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 POT1Q9NUX5 634 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 CHRNA9Q9UGM1 479 aa13.23□□□□□ -0.29
HIF3A-202ENST00000244303 EML5Q05BV3 1969 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 MPDZO75970 2070 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 C2CD4DB7Z1M9 353 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 HRKO00198 91 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 ICMTO60725 284 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 SOX30O94993 753 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 CELA2BP08218 269 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 NAA10P41227 235 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 OR3A3P47888 321 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 BTG1P62324 171 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 UBE2IP63279 158 aaKnown RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 MAB21L1Q13394 359 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 ZNF542PQ5EBM4 170 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 BICRALQ6AI39 1079 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 SIGIRRQ6IA17 410 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 KIRREL2Q6UWL6 708 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 FRMD1Q8N878 549 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 SLC37A2Q8TED4 501 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 LMF2Q9BU23 707 aaKnown RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 CCDC86Q9H6F5 360 aaKnown RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 SERTAD3Q9UJW9 196 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 DTX4Q9Y2E6 619 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 HSPB11Q9Y547 144 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 A0A0A6YYJ9 748 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 A0A0B4J203 849 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 A0A1W2PQ72 361 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 SHISA7A6NL88 538 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 MCIDASD6RGH6 385 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 LRRN3E7EW58 273 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 NOS1APO75052 506 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 TNFP01375 233 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 CAPZA2P47755 286 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 GDI2P50395 445 aaKnown RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 ZNHIT3Q15649 155 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 NTRK2Q16620 822 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 RNASE12Q5GAN4 147 aaKnown RBP13.22□□□□□ -0.29
HIF3A-202ENST00000244303 BCL2L15Q5TBC7 163 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 LINC00114Q6XXX2 140 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 SLC22A18ASQ8N1D0 253 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 LRRC17Q8N6Y2 441 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 TEX19Q8NA77 164 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 OR4D9Q8NGE8 314 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 ANGPTL6Q8NI99 470 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 HSD17B8Q92506 261 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 PELI1Q96FA3 418 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 LRRN3Q9H3W5 708 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 EVA1AQ9H8M9 152 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 ADAM18Q9Y3Q7 739 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 IER3IP1Q9Y5U9 82 aa13.22□□□□□ -0.29
HIF3A-202ENST00000244303 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 TGFBR3LH3BV60 316 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 TSC22D2O75157 780 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 NDUFB2O95178 105 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 SNRPBP14678 240 aaKnown RBP13.21□□□□□ -0.29
HIF3A-202ENST00000244303 ST6GAL1P15907 406 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 TYRP1P17643 537 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 ATF1P18846 271 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 CDK5R1Q15078 307 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 NDUFAF6Q330K2 333 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 SLC36A2Q495M3 483 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 ULK3Q6PHR2 472 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 GHDCQ8N2G8 530 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 GPBAR1Q8TDU6 330 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 SMIM19Q96E16 107 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.29
HIF3A-202ENST00000244303 NPFFR2Q9Y5X5 522 aa13.21□□□□□ -0.29
HIF3A-202ENST00000244303 C10orf142B7Z368 130 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 OGG1O15527 345 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 CDC123O75794 336 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms