RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 UBDO15205 165 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 KLF4O43474 513 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 EFNA2O43921 213 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 H6PDO95479 791 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 INHBBP09529 407 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 CCKARP32238 428 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 SLC1A3P43003 542 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 POLR2HP52434 150 aaKnown RBP11.31□□□□□ -0.6
PDZD11-201ENST00000239666 CRISP3P54108 245 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 STX1BP61266 288 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 UFM1P61960 85 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 SLC35A1P78382 337 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 TOMM34Q15785 309 aaPredicted RBP11.31□□□□□ -0.6
PDZD11-201ENST00000239666 TIMM23BQ5SRD1 257 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 FRRS1Q6ZNA5 592 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 CXorf67Q86X51 503 aaPredicted RBP11.31□□□□□ -0.6
PDZD11-201ENST00000239666 WFDC8Q8IUA0 241 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 SLC35B4Q969S0 331 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 PLPPR2Q96GM1 343 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 MAELQ96JY0 434 aaKnown RBP11.31□□□□□ -0.6
PDZD11-201ENST00000239666 MARK4Q96L34 752 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 CCDC106Q9BWC9 280 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 SRXN1Q9BYN0 137 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 COQ10BQ9H8M1 238 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 TMEM181Q9P2C4 612 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 IFT52Q9Y366 437 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 RNF115Q9Y4L5 304 aa11.31□□□□□ -0.6
PDZD11-201ENST00000239666 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 HS3ST1O14792 307 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 GCM2O75603 506 aaPredicted RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 ADAP00813 363 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 GGT1P19440 569 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 EPHA3P29320 983 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 PHC1P78364 1004 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 TGFBR3Q03167 851 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 MPP2Q14168 576 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 CAPRIN1Q14444 709 aaKnown RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 LIN52Q52LA3 116 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 Q5PR19 223 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 PRAMEF8Q5VWM4 474 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 PRAMEF7Q5VXH5 474 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 FBXW9Q5XUX1 488 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 KLHL17Q6TDP4 642 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 LINC00114Q6XXX2 140 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 BHLHA15Q7RTS1 189 aaPredicted RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 ABHD12BQ7Z5M8 362 aaPredicted RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 RNF130Q86XS8 419 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 MIER2Q8N344 545 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 RAB8BQ92930 207 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 FBXW5Q969U6 566 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 APH1AQ96BI3 265 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 S100PBPQ96BU1 408 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 NPAS1Q99742 590 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 TMEM204Q9BSN7 226 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 SERHL2Q9H4I8 314 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 LIN7BQ9HAP6 207 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 MOV10Q9HCE1 1003 aaKnown RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 SDR39U1Q9NRG7 319 aaPredicted RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 NOSIPQ9Y314 301 aaKnown RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 HRNRQ86YZ3 2850 aaPredicted RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 SETD2Q9BYW2 2564 aaPredicted RBP11.3□□□□□ -0.6
PDZD11-201ENST00000239666 ARID1AO14497 2285 aa11.3□□□□□ -0.6
PDZD11-201ENST00000239666 A0A0G2JPF8 293 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 HNRNPCL2B2RXH8 293 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 HNRNPCL3B7ZW38 293 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 SMAD9O15198 467 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 HNRNPCL1O60812 293 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 VAMP5O95183 116 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 THBDP07204 575 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 VIMP08670 466 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 HNRNPCL4P0DMR1 293 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 KITP10721 976 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 PPIBP23284 216 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 CXCR1P25024 350 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 RYKP34925 604 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 IDH2P48735 452 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 SLC16A1P53985 500 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 RPS4XP62701 263 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 CHRNEQ04844 493 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 FADDQ13158 208 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 NCMAPQ5T1S8 102 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 AGBL2Q5U5Z8 902 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 TMEM108Q6UXF1 575 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 NUFIP2Q7Z417 695 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 UBE2J2Q8N2K1 259 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 WFDC11Q8NEX6 87 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 SF3B5Q9BWJ5 86 aaKnown RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 EVA1AQ9H8M9 152 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 TMBIM4Q9HC24 238 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 ASB6Q9NWX5 421 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 KCNE5Q9UJ90 142 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 CORO2BQ9UQ03 480 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 SLC9A8Q9Y2E8 581 aa11.29□□□□□ -0.6
PDZD11-201ENST00000239666 MAGED1Q9Y5V3 778 aaPredicted RBP11.29□□□□□ -0.6
PDZD11-201ENST00000239666 MTORP42345 2549 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms