RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TBC1D23Q9NUY8 699 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 MRPS18AQ9NVS2 196 aaKnown RBP12.04□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF226Q9NYT6 803 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 FLRT3Q9NZU0 649 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 MYOTQ9UBF9 498 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.04□□□□□ -0.48
SLIRP-201ENST00000238688 FARSAQ9Y285 508 aaKnown RBP12.04□□□□□ -0.48
SLIRP-201ENST00000238688 TP53TG5Q9Y2B4 290 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 PTRH2Q9Y3E5 179 aaKnown RBP12.04□□□□□ -0.48
SLIRP-201ENST00000238688 CNTRLQ7Z7A1 2325 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 TRBV11-1A0A0K0K1C0 115 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 ELOA3DA6NLF2 546 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-201ENST00000238688 EFCAB9A8MZ26 197 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 TP53I11O14683 189 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 NOL3O60936 208 aaKnown RBP12.03□□□□□ -0.48
SLIRP-201ENST00000238688 SEC14L2O76054 403 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 CDK1P06493 297 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 FBXO45P0C2W1 286 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 IFI30P13284 250 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 CASRP41180 1078 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 SLC15A1P46059 708 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 TMBIM6P55061 237 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 PRPS1P60891 318 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 RPS15P62841 145 aaKnown RBP12.03□□□□□ -0.48
SLIRP-201ENST00000238688 HOXC5Q00444 222 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 NTRK2Q16620 822 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 PGGHGQ32M88 737 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 ELOA3BQ3SY89 546 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 KLHL22Q53GT1 634 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 SMARCD3Q6STE5 483 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 OPN5Q6U736 354 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 KIRREL2Q6UWL6 708 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 ATG4DQ86TL0 474 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-201ENST00000238688 SATL1Q86VE3 508 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 GID4Q8IVV7 300 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 LNX2Q8N448 690 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 ELOA3Q8NG57 546 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 OR13F1Q8NGS4 319 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 TMEM163Q8TC26 289 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 FANK1Q8TC84 345 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 MUL1Q969V5 352 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 PLEKHA8Q96JA3 519 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 CTPS2Q9NRF8 586 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 RASSF1Q9NS23 344 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 COMMD3-BMI1R4GMX3 469 aa12.03□□□□□ -0.48
SLIRP-201ENST00000238688 CYSRT1A8MQ03 144 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 ETV2O00321 342 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-201ENST00000238688 PRODHO43272 600 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 SOX14O95416 240 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 HPP00738 406 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 UMODP07911 640 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 COX6A1P12074 109 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 APEHP13798 732 aaKnown RBP12.02□□□□□ -0.49
SLIRP-201ENST00000238688 FUT4P22083 530 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 DCKP27707 260 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 FMO3P31513 532 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 SLC6A6P31641 620 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 ST13P50502 369 aaKnown RBP12.02□□□□□ -0.49
SLIRP-201ENST00000238688 CDH15P55291 814 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 MFSD13AQ14CX5 517 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 SNAPC1Q16533 368 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 SYT6Q5T7P8 510 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-201ENST00000238688 GTF2IRD2BQ6EKJ0 949 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 FAAH2Q6GMR7 532 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 XAF1Q6GPH4 301 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 ARHGAP11AQ6P4F7 1023 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 GTF2IRD2Q86UP8 949 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 CCDC103Q8IW40 242 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 GPALPP1Q8IXQ4 340 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 CADM2Q8N3J6 435 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 RAB2BQ8WUD1 216 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 RORBQ92753 470 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 SGTBQ96EQ0 304 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 GPX7Q96SL4 187 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-201ENST00000238688 DOK1Q99704 481 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 TSSK6Q9BXA6 273 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 CNIH4Q9P003 139 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 RSL24D1Q9UHA3 163 aaKnown RBP12.02□□□□□ -0.49
SLIRP-201ENST00000238688 TCFL5Q9UL49 500 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 SIGLEC7Q9Y286 467 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 YARS2Q9Y2Z4 477 aaKnown RBP12.02□□□□□ -0.49
SLIRP-201ENST00000238688 SLC6A5Q9Y345 797 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF337Q9Y3M9 751 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 HS3ST3B1Q9Y662 390 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 LRRK2Q5S007 2527 aa12.02□□□□□ -0.49
SLIRP-201ENST00000238688 USP9XQ93008 2570 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 NSG1A0A0A6YYJ2 146 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 ANKUB1A6NFN9 424 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF99A8MXY4 864 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 PTGES3LE9PB15 166 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 HCRTR2O43614 444 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 XPNPEP2O43895 674 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 PTP4A3O75365 173 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 NADKO95544 446 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 MT-ATP6P00846 226 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 IFNGP01579 166 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 HTR1AP08908 422 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 SAGP10523 405 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-201ENST00000238688 GP1BBP13224 206 aa12.01□□□□□ -0.49
SLIRP-201ENST00000238688 PCMT1P22061 227 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms