RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 OR5W2Q8NH69 310 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 DPH2Q9BQC3 489 aaPredicted RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 NXF2Q9GZY0 626 aaKnown RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 ZNF160Q9HCG1 818 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 OSGIN1Q9UJX0 560 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 LOC285095A0A1B0GVY8 99 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 A0A1W2PPH5 198 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 M0R1B8 84 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 SORBS2O94875 1100 aaKnown RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 ALX3O95076 343 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 FOLR1P15328 257 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 HTN1P15515 57 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 SLC7A9P82251 487 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 ZP2Q05996 745 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 LMAN2Q12907 356 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 SMAP2Q8WU79 429 aaPredicted RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 G6PC3Q9BUM1 346 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 RALYQ9UKM9 306 aaKnown RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 KLF11O14901 512 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 CACNG3O60359 315 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 EDDM3BP56851 147 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 COL9A3Q14050 684 aaPredicted RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 NATD1Q8N6N6 113 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 SLC24A4Q8NFF2 622 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 MSI2Q96DH6 328 aaKnown RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 PRRT1Q99946 306 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 SEMA4CQ9C0C4 833 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 PRO1933Q9H354 126 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 UBIAD1Q9Y5Z9 338 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 DPM1O60762 260 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 NCR1O76036 304 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 AHSGP02765 367 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 CTRB1P17538 263 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 HTR1EP28566 365 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 MMP12P39900 470 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 HSF5Q4G112 596 aaPredicted RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 CTRB2Q6GPI1 263 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 METAP1DQ6UB28 335 aaPredicted RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 DPPA4Q7L190 304 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 ZNF461Q8TAF7 563 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 TMEM14AQ9Y6G1 99 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 HLA-HP01893 362 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 TRAPPC2P0DI81 140 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 TRAPPC2BP0DI82 140 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 ITGB5P18084 799 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 RPS26P62854 115 aaKnown RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 ZC3H3Q8IXZ2 948 aaKnown RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 C15orf54Q8N8G6 183 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 BLNKQ8WV28 456 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 MOCOSQ96EN8 888 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 CHRDQ9H2X0 955 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 INTS6Q9UL03 887 aaKnown RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 RPL7P18124 248 aaKnown RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 PROZP22891 400 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 THBS3P49746 956 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 AGTR2P50052 363 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 EIF4HQ15056 248 aaKnown RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 ZMAT1Q5H9K5 638 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 OR5AS1Q8N127 324 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 OR4K13Q8NH42 304 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 SPTSSAQ969W0 71 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 MED18Q9BUE0 208 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 KATNB1Q9BVA0 655 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 PARD6AQ9NPB6 346 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 DTLQ9NZJ0 730 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 ONECUT1Q9UBC0 465 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 RCE1Q9Y256 329 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 TCRBV5S4A2TA0A5A2 114 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 EIF3FO00303 357 aaPredicted RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 ZNF17P17021 662 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 SHMT2P34897 504 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 P2RY2P41231 377 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 CEBPEQ15744 281 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 OR4K15Q8NH41 348 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 SLC35B4Q969S0 331 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 ALG8Q9BVK2 526 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 GSTO2Q9H4Y5 243 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 OR6C68A6NDL8 312 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 KIAA1324LA8MWY0 1029 aaPredicted RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 GAPDHSO14556 408 aaPredicted RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 TGFB1I1O43294 461 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 NDUFB7P17568 137 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 NDUFV2P19404 249 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 TNFRSF1BP20333 461 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 WNT4P56705 351 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 PTP4A2Q12974 167 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 SYPL2Q5VXT5 272 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 MOB3CQ70IA8 216 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 ADIPOR2Q86V24 386 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 CASD1Q96PB1 797 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 KLHL13Q9P2N7 655 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 SLC2A6Q9UGQ3 507 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 RASD1Q9Y272 281 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 HBE1P02100 147 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 MMP2P08253 660 aa10.41□□□□□ -0.74
MSH6-201ENST00000234420 RPL24P83731 157 aaKnown RBP10.41□□□□□ -0.74
MSH6-201ENST00000234420 SHEQ5VZ18 495 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms