RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 KIAA0319Q5VV43 1072 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 RDH10Q8IZV5 341 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 TMEM234Q8WY98 164 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 ACKR4Q9NPB9 350 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 ACER3Q9NUN7 267 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 MRPS17Q9Y2R5 130 aaKnown RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 M0QZQ0 153 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 SHOXO15266 292 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 TAPBPO15533 448 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 HOXB5P09067 269 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 SEMA3BQ13214 749 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 FAHD1Q6P587 224 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PAQR6Q6TCH4 344 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 ZNF578Q96N58 590 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 MVB12BQ9H7P6 319 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 ZNF443Q9Y2A4 671 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 MYH14Q7Z406 1995 aaKnown RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 ZAR1LA6NP61 321 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 AGAP14A8MT82 685 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PLGP00747 810 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 MARCH8Q5T0T0 291 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 LIX1LQ8IVB5 337 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 CDRT4Q8N9R6 151 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 OR7D2Q96RA2 312 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 SPIN2AQ99865 258 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 SPIN2BQ9BPZ2 258 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 SLC6A14Q9UN76 642 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 TARM1B6A8C7 271 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 K7EPK0 472 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 IMPA2O14732 288 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 CLDN6P56747 220 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 STEAP1BQ6NZ63 245 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 MAMDC2Q7Z304 686 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 FAM71E2Q8N5Q1 922 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 OR51T1Q8NGJ9 327 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 IRF7Q92985 503 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PNPLA2Q96AD5 504 aa12.88□□□□□ -0.35
HCFC2-201ENST00000229330 ACSS1Q9NUB1 689 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 N4BP2Q86UW6 1770 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-201ENST00000229330 PPP1R2P9O14990 202 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 OPRD1P41143 372 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 SUOXP51687 545 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 GALK2Q01415 458 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 SLC9A3R2Q15599 337 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 FAM26EQ8N5C1 309 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 CDS1Q92903 461 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 INTS14Q96SY0 518 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 TSPAN10Q9H1Z9 355 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 PPT2Q9UMR5 302 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 ETV7Q9Y603 341 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 NUDT19A8MXV4 375 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 CRTAPO75718 401 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 TAF1P21675 1872 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 KCNJ5P48544 419 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 DGCR2P98153 550 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 TNK1Q13470 666 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 GAB1Q13480 694 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 HIST2H3PS2Q5TEC6 136 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 LKAAEAR1Q8TD35 194 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 KLRF1Q9NZS2 232 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 ANKRD36CQ5JPF3 1778 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 FOXE1O00358 373 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 OR2T7P0C7T2 308 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 CNR1P21554 472 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 AKR1C2P52895 323 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 AKR1C1Q04828 323 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 PDE7AQ13946 482 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 C1orf94Q6P1W5 598 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 OR2T27Q8NH04 317 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 BTBD2Q9BX70 525 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 A4GALTQ9NPC4 353 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 ACOXLQ9NUZ1 547 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 RHOP08100 348 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 FURINP09958 794 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 TRA2BP62995 288 aaKnown RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 KIAA0141Q14154 515 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 EBPQ15125 230 aaKnown RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 OR1Q1Q15612 314 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 ADAM5Q6NVV9 412 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 C3orf33Q6P1S2 294 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 IKZF5Q9H5V7 419 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 GABARAPH6UMI1 98 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 EPHA2P29317 976 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 PTGER1P34995 402 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 PUS10Q3MIT2 529 aaKnown RBP12.87□□□□□ -0.35
HCFC2-201ENST00000229330 TANGO2Q6ICL3 276 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 SLC39A5Q6ZMH5 540 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 MED18Q9BUE0 208 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 NOX4Q9NPH5 578 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 C2orf42Q9NWW7 574 aa12.87□□□□□ -0.35
HCFC2-201ENST00000229330 TESQ9UGI8 421 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms