RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 STOML1Q9UBI4 398 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 H0Y3Z8 333 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 DEAF1O75398 565 aaPredicted RBP24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 LDLRP01130 860 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 ZNF708P17019 499 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 IST1P53990 364 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 UGT2B15P54855 530 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 CLDN18P56856 261 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 LSM11P83369 360 aaKnown RBP eCLIP24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 ATP6AP1Q15904 470 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 EXOC3L2Q2M3D2 409 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 C1QL3Q5VWW1 255 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 TBPL2Q6SJ96 375 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 GFRALQ6UXV0 394 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 ZNF730Q6ZMV8 503 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 AMIGO2Q86SJ2 522 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 GGNQ86UU5 652 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 PFN4Q8NHR9 129 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 KLHL15Q96M94 604 aa24.53■■□□□ 1.52
CHMP4B-201ENST00000217402 DNAJC13O75165 2243 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 A0A1W2PNR3 127 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 GJE1A6NN92 205 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 EIF1AYO14602 144 aaKnown RBP24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 PIP5K1CO60331 668 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 RBM34P42696 430 aaKnown RBP24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 MAP2K6P52564 334 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 SUCLG1P53597 346 aaKnown RBP24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 LAPTM4AQ15012 233 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 SEC23BQ15437 767 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 CHERPQ8IWX8 916 aaKnown RBP24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 ACOT11Q8WXI4 607 aaPredicted RBP24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 SARAFQ96BY9 339 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 KTI12Q96EK9 354 aaPredicted RBP24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 ALPK1Q96QP1 1244 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 TMEM43Q9BTV4 400 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 CAMK2AQ9UQM7 478 aa24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 RRP15Q9Y3B9 282 aaKnown RBP24.52■■□□□ 1.52
CHMP4B-201ENST00000217402 SVILO95425 2214 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 A0A087WUU8 490 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 TNFSF11O14788 317 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 E2F6O75461 281 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 C1orf140Q5VVS0 124 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 HMBOX1Q6NT76 420 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 STK35Q8TDR2 534 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 HS6ST2Q96MM7 605 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 PKP2Q99959 881 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 SEMA6AQ9H2E6 1030 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 TMCC3Q9ULS5 477 aa24.51■■□□□ 1.51
CHMP4B-201ENST00000217402 SMG1Q96Q15 3661 aaKnown RBP24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 A0A0J9YW62 118 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 EDN3P14138 238 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 PTGS2P35354 604 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 RPS5P46782 204 aaKnown RBP24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 CLDN15P56746 228 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 MYBPHQ13203 477 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 MEIOBQ8N635 442 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 OR4C15Q8NGM1 316 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 OR5M9Q8NGP3 310 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 WDYHV1Q96HA8 205 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 FUZQ9BT04 418 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 MEPEQ9NQ76 525 aaPredicted RBP24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 RALYQ9UKM9 306 aaKnown RBP24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 MED31Q9Y3C7 131 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 OR14I1A6ND48 311 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 NPIPB7O75200 414 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 AHSA1O95433 338 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 FKBP2P26885 142 aaKnown RBP24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 LIMS1P48059 325 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 RCN1Q15293 331 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 CTU2Q2VPK5 515 aaKnown RBP24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 SOWAHCQ53LP3 525 aaPredicted RBP24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 NRMQ8IXM6 262 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 COQ10BQ9H8M1 238 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 NTN4Q9HB63 628 aa24.5■■□□□ 1.51
CHMP4B-201ENST00000217402 SH3PXD2BA1X283 911 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 BAG2O95816 211 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 BCL2A1Q16548 175 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 ESPNLQ6ZVH7 1005 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 RRM2BQ7LG56 351 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 TMEM179BQ7Z7N9 219 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 MEX3DQ86XN8 651 aaKnown RBP24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 C10orf53Q8N6V4 93 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 OR4K5Q8NGD3 323 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 OR2V1Q8NHB1 315 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 EPYCQ99645 322 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 SLC19A3Q9BZV2 496 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 C20orf141Q9NUB4 165 aa24.49■■□□□ 1.51
CHMP4B-201ENST00000217402 TRAV36DV7A0A075B6V5 113 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 CPN1P15169 458 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 ABOP16442 354 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 IDUAP35475 653 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 EIF1AXP47813 144 aaKnown RBP24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 CLK1P49759 484 aaKnown RBP24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 HMGA2P52926 109 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 WLSQ5T9L3 541 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 HBMQ6B0K9 141 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 MBOAT2Q6ZWT7 520 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 PRICKLE2Q7Z3G6 844 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 OR10D3Q8NH80 312 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 TAAR8Q969N4 342 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms