RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 NUP54Q7Z3B4 507 aa27.12■■□□□ 1.93
PABPN1-201ENST00000216727 CENPSQ8N2Z9 138 aa27.12■■□□□ 1.93
PABPN1-201ENST00000216727 ADAM19Q9H013 955 aa27.12■■□□□ 1.93
PABPN1-201ENST00000216727 NRIP3Q9NQ35 241 aa27.12■■□□□ 1.93
PABPN1-201ENST00000216727 YARS2Q9Y2Z4 477 aaKnown RBP27.12■■□□□ 1.93
PABPN1-201ENST00000216727 ASCC3Q8N3C0 2202 aaKnown RBP27.11■■□□□ 1.93
PABPN1-201ENST00000216727 PNMA8CA0A1B0GUJ8 204 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 IDSB3KWA1 339 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 SBK2P0C263 348 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 IFITM3Q01628 133 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 GALEQ14376 348 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 ANKRD37Q7Z713 158 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 TMEM99Q8N816 258 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 OR52E2Q8NGJ4 325 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 CEP76Q8TAP6 659 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 TP53INP1Q96A56 240 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 COX4I2Q96KJ9 171 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 KCTD7Q96MP8 289 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 TIMP4Q99727 224 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 MED18Q9BUE0 208 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 ALG8Q9BVK2 526 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 BARHL1Q9BZE3 327 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 FAIMQ9NVQ4 179 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 IER3IP1Q9Y5U9 82 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 TRDV1A0A1B0GX56 115 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 HIST1H1CP16403 213 aaKnown RBP27.11■■□□□ 1.93
PABPN1-201ENST00000216727 POU4F2Q12837 409 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 ZNF74Q16587 644 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 ZNF385CQ66K41 422 aaPredicted RBP27.11■■□□□ 1.93
PABPN1-201ENST00000216727 FAAH2Q6GMR7 532 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 C22orf42Q6IC83 251 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 ZNF563Q8TA94 476 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 TM9SF2Q99805 663 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 SYNDIG1Q9H7V2 258 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 ADGRL4Q9HBW9 690 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 TOR4AQ9NXH8 423 aa27.11■■□□□ 1.93
PABPN1-201ENST00000216727 DAPL1A0PJW8 107 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 NDUFB5O43674 189 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 IDH3BO43837 385 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 HEXBP07686 556 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 CLUP10909 449 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 GRK6P43250 576 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 SLC16A1P53985 500 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 GPR50Q13585 617 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 CRTC2Q53ET0 693 aaPredicted RBP27.1■■□□□ 1.93
PABPN1-201ENST00000216727 IFI44Q8TCB0 444 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 SLC25A46Q96AG3 418 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 RNF31Q96EP0 1072 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 TBCCD1Q9NVR7 557 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 PPIEQ9UNP9 301 aaKnown RBP27.1■■□□□ 1.93
PABPN1-201ENST00000216727 GSTK1Q9Y2Q3 226 aa27.1■■□□□ 1.93
PABPN1-201ENST00000216727 SAGE2PA6NJ88 616 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 MAGEB3O15480 346 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 HCRTR2O43614 444 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 GAAP10253 952 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 RPL4P36578 427 aaKnown RBP27.09■■□□□ 1.93
PABPN1-201ENST00000216727 RNF4P78317 190 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 OVCH1Q7RTY7 1134 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 ZFP41Q8N8Y5 198 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 OR4K13Q8NH42 304 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 ZNF524Q96C55 264 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 TBL1XR1Q9BZK7 514 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 SNTG1Q9NSN8 517 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 ASB6Q9NWX5 421 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 BABAM2Q9NXR7 383 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 FBXL4Q9UKA2 621 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 HIF3AQ9Y2N7 669 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 FOXL2P58012 376 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 FABP5Q01469 135 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 EGR4Q05215 589 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 MARCH3Q86UD3 253 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 PPP1R3BQ86XI6 285 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 FAM98AQ8NCA5 519 aaKnown RBP27.09■■□□□ 1.93
PABPN1-201ENST00000216727 NFAM1Q8NET5 270 aaPredicted RBP27.09■■□□□ 1.93
PABPN1-201ENST00000216727 OR10H4Q8NGA5 316 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 MROQ9BYG7 248 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 MMP25Q9NPA2 562 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 QPCTLQ9NXS2 382 aa27.09■■□□□ 1.93
PABPN1-201ENST00000216727 OR6C70A6NIJ9 312 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 VSTM2BA6NLU5 285 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 ALOX12BO75342 701 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 CDRT1O95170 752 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 CER1O95813 267 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 CELP19835 753 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 TACR3P29371 465 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 ATP1A4Q13733 1029 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 KLBQ86Z14 1044 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 ARIH2OSQ8N7S6 290 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 APCDD1LQ8NCL9 501 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 SDR9C7Q8NEX9 313 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 ATP6V1C2Q8NEY4 427 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 ISG20L2Q9H9L3 353 aaKnown RBP27.08■■□□□ 1.93
PABPN1-201ENST00000216727 ADAM18Q9Y3Q7 739 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 ADAMTS9Q9P2N4 1935 aa27.08■■□□□ 1.93
PABPN1-201ENST00000216727 IGHV3-20A0A0C4DH32 117 aa27.07■■□□□ 1.92
PABPN1-201ENST00000216727 HLA-DPB1P04440 258 aa27.07■■□□□ 1.92
PABPN1-201ENST00000216727 GALP22466 123 aa27.07■■□□□ 1.92
PABPN1-201ENST00000216727 ACTC1P68032 377 aa27.07■■□□□ 1.92
PABPN1-201ENST00000216727 ACTA1P68133 377 aa27.07■■□□□ 1.92
PABPN1-201ENST00000216727 CCDC190Q86UF4 302 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms